Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_017984.1 Length=46387 Score E Sequences producing significant alignments: (Bits) Value seq165 100 8e-17 >seq165 Length=448888 Score = 100 bits (110), Expect = 8e-17 Identities = 147/208 (71%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 41793 TTTATCGCAGTTAAGCCGAAAGGTTGAGGATAGAGCAGATAAGCGCCCAATGATGAGTGA 41852 ||| || ||| | | ||||| | ||| | | |||||||| ||||| ||| ||| Sbjct 62056 TTTGTCACAGCTTAACCGAAGCTTAGAGCAGCGTGCAGATAAACGCCCTGTGAACTCTGA 61997 Query 41853 TTTGCGTGAATCTGGCCAAATCGAACAAGATGCCAATACGATTTTATTTATTTATCGTGA 41912 || |||||||| ||| ||||| || ||||| | ||| | |||||||||||||| Sbjct 61996 CTTACGTGAATCAGGCTCTATCGAGCAGGATGCTGACCTTATTATGTTTATTTATCGTGA 61937 Query 41913 TGAGGTTTACAACAAACAAAGTAAAGATATTGGGATTGCTGAAATTATTGCAGCTAAAGT 41972 ||||||||| || | | ||| || | ||| |||||||||||||| || ||| Sbjct 61936 TGAGGTTTATCACGATAATAGTGAATTGAAAGGGGTTGCTGAAATTATTTTAGGTAAGCA 61877 Query 41973 CCGTGATGGTGAAGTTGGCACGGTTCGA 42000 ||| ||||| | |||| ||||||||| Sbjct 61876 ACGTAATGGTCCAATTGGTACGGTTCGA 61849 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 148313782958194