Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_018279.1 Length=49116 Score E Sequences producing significant alignments: (Bits) Value seq366 159 1e-34 >seq366 Length=2776 Score = 159 bits (176), Expect = 1e-34 Identities = 199/273 (73%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 47777 TGGAGTACAAGCCTATGACCGATGCCATCAAGCATGAGCGTGAGGCGCAGGGTAAGCAGA 47836 |||| || ||||| ||||||||||| |||| | | | | |||| || || ||| | Sbjct 2219 TGGAATATAAGCCAATGACCGATGCGGTCAAAAAGGCGAGAGAGGAACAAGGCAAGACTA 2160 Query 47837 TCGCCCCGCATCACTTCAGCAACGAAGCTGACCTGATTAATCGACTGGCGCTGGGCATGA 47896 | | || || || || || || ||||| ||| | |||||||| | | ||| || |||| Sbjct 2159 TTTCACCTCACCATTTTAGTAATGAAGCAGACTTAATTAATCGCATTGTGCTTGGTATGA 2100 Query 47897 CGGCGGCCAAGTTCCGCGTGCATCACGAAATCGGGAAGAAAGAGCCGATCCGCGATTACC 47956 | | || ||||| || || ||| ||||||| || ||||||||||| ||||| |||||| Sbjct 2099 CATCTGCTAAGTTTCGTGTACATAACGAAATAGGAAAGAAAGAGCCTATCCGTGATTACT 2040 Query 47957 TGACGCCGGAACAAATTCACTGCATCACCGAGCTACAGCGCGCCAACACGGTATTCATCA 48016 | || || || ||||| || ||| | || || |||| | |||||||| || || ||| Sbjct 2039 TAACACCAGAGCAAATACATTGCGTAACTGAATTACAAAGAGCCAACACAGTGTTTATCT 1980 Query 48017 GCATGGGGTGGGACTTCGAACAACGCAAAGAAG 48049 ||||| ||| |||| |||||||| || |||| Sbjct 1979 CAATGGGATGGAACTTTGAACAACGAAAGGAAG 1947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157046405316668