Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_018504.1
Length=123876
Score E
Sequences producing significant alignments: (Bits) Value
seq964 174 1e-38
seq1190 167 2e-36
seq1304 129 5e-25
>seq964
Length=291957
Score = 174 bits (192), Expect = 1e-38
Identities = 170/219 (78%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||| || || || |||||||||||||||||||| || || ||||||| | ||| | |
Sbjct 215857 AAACGCAATACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAATCGGATAAAGTGCGG 215798
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
|||| ||||| || ||||| || || ||||||||||||||||| || ||||| ||||||
Sbjct 215797 CCATCTTCCAACTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCT 215738
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|| ||||| ||||| ||| ||| |||||| ||| || || | ||| || || | ||
Sbjct 215737 TTGTCTTGGATTTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAACCTCCAATGTA 215678
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
| ||||| || ||||| ||||| || || || ||||||
Sbjct 215677 ATTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCATG 215639
Score = 170 bits (188), Expect = 2e-37
Identities = 169/219 (77%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
|||||||| || ||||| | |||||||||||||||||||| ||||| | | || |
Sbjct 215629 AAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAGACAATGTGCGC 215570
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
| || |||||||| || || ||||| |||||||| |||||||| || || || ||||||
Sbjct 215569 CCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCT 215510
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|| ||||||||||| ||| ||| |||| | ||| ||||| | || ||||| | ||||
Sbjct 215509 TTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCAACTTCCAAAGTG 215450
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470
| |||||||| || || || || ||||| || ||||||
Sbjct 215449 ATGGTTTTGCCAGTCAATGTCTTAACAAAGATTTGCATG 215411
Score = 159 bits (176), Expect = 3e-34
Identities = 166/218 (76%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 101252 AAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTG 101311
||||||| ||| || || || |||||||||||||| ||||| ||||||| | ||| |
Sbjct 215401 AAACGTAGAACCAAGTGGAGAGTAGATTCTTTTTGAATATTATAATCGGACAAAGTGCGT 215342
Query 101312 GCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCT 101371
| || |||||||| ||||| ||||| || | ||| |||||||| || ||||| || ||
Sbjct 215341 CCGTCTTCCAATTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCC 215282
Query 101372 TTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTG 101431
|||||||||||||| || ||| |||| | || || || | ||| || ||||| |||
Sbjct 215281 TTATCTTGAATTTTAGCCTTAACATTTTCAATCGTATCCGAAGGTTCGACCTCAAGGGTG 215222
Query 101432 ACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
| || ||||| |||||||| || || || || |||||
Sbjct 215221 ATGGTCTTGCCAGTTAAAGTCTTCACGAAGATTTGCAT 215184
Score = 131 bits (144), Expect = 1e-25
Identities = 165/227 (73%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302
||||| | | ||||| || ||||| ||||| || || ||||| || ||||| || |
Sbjct 217109 CCTCCACGAAGACGTAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGAC 217050
Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362
| || | |||| |||| ||| ||||| || || |||||||| || ||||| || |||
Sbjct 217049 AAGGTACGACCATCTTCCAGTTGTTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGA 216990
Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422
|| ||||| ||||| || ||||| ||||| | || | || || || | ||| |||
Sbjct 216989 ATACCTTCCTTATCCTGGATTTTAGCCTTTACGTTCTCAATGGTATCGGAAGGTTCGACT 216930
Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| | ||||| ||||||||||| || ||||| || || || |||||
Sbjct 216929 TCCAAAGTGATGGTTTTGCCGGTCAAGGTTTTAACGAAGATTTGCAT 216883
Score = 98.7 bits (108), Expect = 8e-16
Identities = 102/134 (76%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 101336 AATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACA 101395
|| |||||||| |||||||| || ||||| ||||| ||||| || || || || |||
Sbjct 216001 AAGATCAAACGTTGTTGATCTGGGGGAATACCTTCCTTATCCTGGATCTTGGCCTTAACA 215942
Query 101396 ATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTT 101455
| || | |||||| || | ||| ||||| | || | ||||||||||||||||||||
Sbjct 215941 TTCTCAATAGTGTCGGAAGGTTCAACTTCCAAGGTAATAGTTTTGCCGGTTAAAGTTTTA 215882
Query 101456 ACAAATATCTGCAT 101469
|| || || |||||
Sbjct 215881 ACGAAAATTTGCAT 215868
>seq1190
Length=275307
Score = 167 bits (184), Expect = 2e-36
Identities = 166/215 (77%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 101255 CGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCA 101314
|| || || || || | || ||||||||||| ||||||||||| | || ||| | | ||
Sbjct 186887 CGCAATACCAAGTGCAAAGTGGATTCTTTTTGAATATTGTAATCAGAGAGAGTACGGCCA 186828
Query 101315 TCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTA 101374
|| |||||||| || || || || |||||||| |||||||| || ||||| ||||||||
Sbjct 186827 TCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTG 186768
Query 101375 TCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACC 101434
|| ||||| || ||| ||| |||| | |||||| |||| || || ||||||||||
Sbjct 186767 TCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCGGACGGCTCGACCTCAAGAGTGATG 186708
Query 101435 GTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| || || |||| ||||| ||||| ||||||||
Sbjct 186707 GTCTTACCCGTTAGGGTTTTGACAAAAATCTGCAT 186673
>seq1304
Length=336898
Score = 129 bits (142), Expect = 5e-25
Identities = 154/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320
|| ||||| | || ||||| ||||| || ||||| |||| | || | |||| |||
Sbjct 274191 ACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCC 274250
Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380
||||| ||||| || || |||||||| |||||||| || || || |||||||| |||||
Sbjct 274251 AATTGTTTACCAGCGAAGATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGG 274310
Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440
||||| || ||| |||| | ||||| || | || ||||| | || | || ||
Sbjct 274311 ATTTTGGCCTTGACATTTTCAATGGTGTCGGAAGGCTCAACTTCCAAGGTAATGGTCTTA 274370
Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469
|| ||||||||||| || || ||||||||
Sbjct 274371 CCAGTTAAAGTTTTGACGAAGATCTGCAT 274399
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 396270126821541
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |