Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_018837.1 Length=122024 Score E Sequences producing significant alignments: (Bits) Value seq253 100 2e-16 >seq253 Length=360942 Score = 100 bits (110), Expect = 2e-16 Identities = 257/385 (67%), Gaps = 10/385 (3%) Strand=Plus/Minus Query 54017 ACCGAGAAAGAAGTGTACGATGCCTGTCAAGCACTGGAGTATGA-GTGCAATTCTCTTTA 54075 ||||| |||||| |||||||||| ||| | || || || || ||| || | || | Sbjct 105319 ACCGAAAAAGAATGTTACGATGCCTTCCAATCCCTTGAATACGAAGTG-AACACACTGCA 105261 Query 54076 TAACTCCAATGGTCAGACCCCATTTATTACATTCGGATTTGGTCTGGGAGAATCTTGGGA 54135 || | |||||||||| ||||| || | || || || |||||| | || ||| || Sbjct 105260 TACCGCCAATGGTCAAACCCCCTTCGTAACCTTTGGGTTTGGTTTAGGCACATCGCAAGA 105201 Query 54136 GTCTAGACTAATCCAAAGATCTATTCTAGAAGTCCGTATGAAAGGTCTAGGAGCAGACAA 54195 | | | |||||| ||| |||||| || |||||| || |||| | || Sbjct 105200 AGCACGCTTGATCCAACAATCCATTCTAAAAAACCGTATCGCTGGGTTAGGTAAA---AA 105144 Query 54196 ACGTACAGCTA---TTTTTCCTAAGCTGGTGTTTGCATTGAAACCTGGTCTCAATATGCA 54252 |||| | || |||| ||||| | |||||||| | ||| || || ||| || Sbjct 105143 TCGTAAAACTGCCGTTTTCCCTAAATTAGTGTTTGCTATTAAAAAAGGCCTTAATCACCA 105084 Query 54253 AGCAGGAGATCCTAACTACGACATTAAACAGTTAGCTATTA-AATGTACTTCTGAGCGTA 54311 | || ||||||||||| || || ||||||||||| |||| | ||| | | || | Sbjct 105083 ATATGGTGATCCTAACTATGATATCAAACAGTTAGC-ATTAGAGTGTGCGAGCAAACGCA 105025 Query 54312 TTTACCCTGACTACGTGAGTTATGATAAGGTTGTGGAAGTTACGGGAGACTTTAAGTTCC 54371 | || || ||| | | | ||||| || ||||| || || ||||| ||||| | Sbjct 105024 TGTATCCCGACATCTTAAACTATGACAAAGTTGTCGATGTAACGGGCTCGTTTAAAACGC 104965 Query 54372 CTATGGGTTGCAGGAGCTTCTTAGG 54396 | ||||| ||| | ||||||||||| Sbjct 104964 CAATGGGCTGCCGCAGCTTCTTAGG 104940 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390343850548105