Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq229 150 1e-31 >seq229 Length=456533 Score = 150 bits (166), Expect = 1e-31 Identities = 199/276 (72%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 50793 CCATTTAGCGACTTCCGACCAATCCCAGAGTGGAGACTGACCGCTGATGCGCTGTACAGG 50852 ||| || || ||||| | ||||||||| || || || || || | |||||||| | || Sbjct 108089 CCAGTTTGCCACTTCAGCCCAATCCCATAGCGGTGATTGGCCTTTAATGCGCTGAATTGG 108148 Query 50853 GCAAGGGAAATCGCCTTTGCCACGTAAGCCGTCTTTAAGCAGAGTGATAGCCTGGCGGGT 50912 || ||| ||||| || ||||| || ||||| | || | || || || || | Sbjct 108149 GCTAGGAAAATCCCCAGAACCACGCGTACCATCTTTTAACATTGCAATCGCTTGTCGTGA 108208 Query 50913 TAAGCCGGAGAGTTGAGCGATATCACTCAAACCTACCAGTGCTGAATCTACCGATTCCAC 50972 ||| | | || |||||| ||||| ||||| || | ||||||||| ||||| || || Sbjct 108209 TAAATGAGTTAATTCAGCGATGTCACTTAAACCAACTAATGCTGAATCAACCGAATCAAC 108268 Query 50973 CACTGCGCCAATACCTGCTGTTTCAATATTATCGATTGCCGATTTGATTGCCTGATCTAA 51032 ||| || || || || |||||||||||||||| || |||| ||||| | |||||| Sbjct 108269 TTTTGCCCCGATCCCCGCCATTTCAATATTATCGATCGCTGATTCAATTGCTTTATCTAA 108328 Query 51033 AGATTCAGCTTCTCTGTCAAATTCTACATACACTGA 51068 |||| ||||| ||||||||||||| ||| || || Sbjct 108329 TGATTGGGCTTCCCTGTCAAATTCTAAATAAACAGA 108364 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330425101509180