Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019402.1 Length=76631 Score E Sequences producing significant alignments: (Bits) Value seq253 113 2e-20 >seq253 Length=360942 Score = 113 bits (124), Expect = 2e-20 Identities = 216/316 (68%), Gaps = 2/316 (1%) Strand=Plus/Plus Query 46518 AGCAACTTGAGCGGTAATCTGAGCCATTACTGCACATGCCACACCAATAGATTTGGGTGA 46577 ||| ||||||||| |||| || || | ||||| || ||| ||||| || | Sbjct 105458 AGCTACTTGAGCGATAATTTGGGCTGTCACTGCGGTGGCAGTGGAAATTGATTTAGGAGG 105517 Query 46578 TTCGATTTGAGCATTACCTAACTTGAAGCCATTTTCCAACATACCTTTGAGGTCAACCAA 46637 || |||| |||||||| | || || ||||| ||||| |||| || |||| || Sbjct 105518 CTCTATTTCGGCATTACCCATTTTAAACCCATTAGTTAACATGCCTTCAAGATCAATCAG 105577 Query 46638 ACAGCAGTTGGTCATAGGTAGGAATGGAGAGTAGTCCAAATCGTGGTAATGAATTTCGCC 46697 ||||| ||| || | ||||| | || || | |||||| ||||||||||| || Sbjct 105578 CATACAGTTAAACATGGGGAAAAATGGCGCATAATCGAGATCGTGATAATGAATTTCACC 105637 Query 46698 TCTCTCGTGAGCATCAACAATGTCCCGAGGAAGAATGTAGTTG-CGAGCGAAATGCTTAG 46756 | ||||||||| ||| | || || || | ||| | |||| |||| ||||||| | Sbjct 105638 GCGTTCGTGAGCAATAACCACATCACGTGGCAAAATAT-GTTGTTTAGCGTAATGCTTTG 105696 Query 46757 AAACAACGCCGGCAAGTAAATCTCGCTGTACAGGGAAGACTTTGGCATCCTTGTTAGCGT 46816 |||| ||| || || ||||| || || ||||| |||||| || ||||| || | Sbjct 105697 CGACAATGCCTGCGAGCAAATCACGTTGGGTAGGGATCACTTTGCTGTCTTTGTTTGCAT 105756 Query 46817 TTTCTTTGAGGATTGA 46832 |||| ||||| | ||| Sbjct 105757 TTTCATTGAGTAATGA 105772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 245089283118256