Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019445.1 Length=44784 Score E Sequences producing significant alignments: (Bits) Value seq599 159 1e-34 >seq599 Length=2526 Score = 159 bits (176), Expect = 1e-34 Identities = 243/346 (70%), Gaps = 0/346 (0%) Strand=Plus/Minus Query 22004 ACCATCCTTGCCAATCATCTTTTTCAGAAGCACAGCATTGTTGACTGGTGCTTCTCTATT 22063 |||||| | || ||||| || ||||| ||| ||| |||| ||| || |||||| Sbjct 803 ACCATCATGGCTAATCACCTATTTCAACGCCACCAGATTATTGATTGGGCGTTTTCTATT 744 Query 22064 GTCCCTTACTCCAGCGCCTTCTGCATTCGTGATGACGGTAAATTACTGGTGATGACCTAT 22123 || |||||||| | ||||| || |||||||| ||||| |||||||| |||| || Sbjct 743 GTTCCTTACTCAATCGCCTGGTGTATTCGTGACGACGGAAAATTACTTTCATTGACGTAC 684 Query 22124 TTGCGTGATCAGCAGGTTTTTGCATGGGCACCACAATCCAGTACCGGAAAATATGAAAGC 22183 | | || ||||| || ||||| ||||| |||||| | ||| ||| |||| Sbjct 683 CTCAGAGAGCAGCAAGTATTTGCTTGGGCGCCACAAGAAACAGACGGGCAATTTGAATCA 624 Query 22184 ACATGCAGTATCAGCGAAGGCAATGAAGATGCGGTGTATTTCGTCGTTAACCGAACCGTT 22243 || ||||| |||| ||||| |||||||||||||| || ||| | || ||| | ||| Sbjct 623 ACCTGCAGCGTCAGTGAAGGTAATGAAGATGCGGTTTACTTCATTGTGTGCCGTAAAGTT 564 Query 22244 AACGGGCAAACAGTGAGATACATCGAGCGACTGTCCAGCCGTTTATTTACCAGCGATGAA 22303 || ||| | ||||| ||||| || || || ||||||| | || Sbjct 563 GGTGGCGGTGAGGTGCGTTACATAGAGCGTTTGAGTAGTCGCCTATTTACTAAGACAGAG 504 Query 22304 GATGCTTTCTTTGTTGATTCTGGCCTTAGTTATGATGGAAGAAATA 22349 || |||||||||||||||||||| || |||||||| || ||||||| Sbjct 503 GACGCTTTCTTTGTTGATTCTGGTCTAAGTTATGACGGCAGAAATA 458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143184287303876