Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019485.1 Length=59080 Score E Sequences producing significant alignments: (Bits) Value seq410 383 6e-102 >seq410 Length=72445 Score = 383 bits (424), Expect = 6e-102 Identities = 1021/1532 (67%), Gaps = 76/1532 (5%) Strand=Plus/Minus Query 16778 GAACTGGGAAAAGATATTATTAAGTTTGCTGAATATCCGGATACAGTTAAAGAAATTTCT 16837 ||| |||| || |||||||| ||| || || |||||| | || | |||||| Sbjct 63130 GAATTGGGTAAGGATATTATACAGTATGTGGATTATCCGCAGACTATACCTGAAATTGAA 63071 Query 16838 GATTGGCTGCAAAAGCTTCATACATATCCTGCACTTTCTGCGGATATCGAAGCATGGAGT 16897 | ||||| ||||||||||| || || ||||| | |||||| ||||| | ||| Sbjct 63070 GCCTGGCTTGAAAAGCTTCATGACTACCCAACACTTGCAATGGATATTGAAGCCTACAGT 63011 Query 16898 TTAAAATTCTATGAAGCCCGATTAGGTACAATTTCATTTGCATGGAACCAACATGAAGGA 16957 | ||||| ||| | || | |||||||||| || ||||||||||||||||||||||| Sbjct 63010 CTTAAATTTTATAAGGCTGGTCTAGGTACAATATCTTTTGCATGGAACCAACATGAAGGT 62951 Query 16958 ATTGCATTCGCCGTAGATT--TTGAAAGAAACTATGAAGATGCAT--TAG-CAA-TACGA 17011 ||||| || || || ||| | | | || ||| | ||| ||| |||| Sbjct 62950 ATTGCCTTTAATGTTGACCACTTGC--GTACCGAT----ATGGAACGTAGACAAGTACGT 62897 Query 17012 TTATTATTGAAGGGATTCTTTACAGAGTATAAAGGAAAAATGTTA---TGGCATAACGGA 17068 | ||| | | ||||||||| | ||||| || | || | |||||||| || Sbjct 62896 TGGTTACTTACCCGATTCTTTAAATCTTATAAGGGTAG---GTCACGGTGGCATAATGGT 62840 Query 17069 AGCTATGACTTAACAGTAATAATCTATGAACTATGGATGAATGGGTTGTTAGATCAGAAA 17128 ||||||||||||||||| || |||||||| ||| ||||| |||||||| || | Sbjct 62839 AGCTATGACTTAACAGTGATTATCTATGAGTTATTTATGAAATCATTGTTAGACCAACGA 62780 Query 17129 GGTTTACTTACTGGTTTAGATGTCATGACTAAAAATTGGCATGATACTAAAATTATAACT 17188 ||||| | |||||||| ||| |||||| ||||||||||||| || || Sbjct 62779 GGTTTGTTGGAAGGTTTAGACACTATGTGCCGCAATTGGGATGATACTAAAATCATCACA 62720 Query 17189 TATTTAGCCACAAACTCATGTGCTGGTAATCATTTAGGACTCAAAGCTCAGTCTCATGAA 17248 |||||||| || ||| ||| | || |||||||| | |||||| | || || || Sbjct 62719 TATTTAGCGACCAACAACTGTTCACAAAACCATTTAGGTTTAAAAGCTAACTCACACGAG 62660 Query 17249 TACGCAGGTAATTACGCATTAGACGATATCAAAGATATCAGCTTAATACCTAAGAAAGAT 17308 | |||||||| || || |||| |||||||| ||||||| |||||||| ||||| Sbjct 62659 TTTGCAGGTAACTATGCTGTAGAAGATATCAATGATATCAATCTAATACCTCCTAAAGAG 62600 Query 17309 CTGGTTCGATATAACCTCATTGATAGTCTGTGTACGTGGTATGTCTATGGTAAGCATTGG 17368 | | ||||||| ||| ||| | | || ||||| |||| ||| ||||| Sbjct 62599 TTATTGGAATATAACGTCAAAGATTCCTTATCCACTAACTATGTTTATGACAAGTATTGG 62540 Query 17369 CAAACCATGAATGATGATAATCAGAGAGAATTGTATGATGATCTGTTCATGCCATCTCTG 17428 | || | | |||||||||| | | | ||||| | | | ||||| | | Sbjct 62539 CCTACTGTACTAGCTGATAATCAGCGTTATGTATATGAAGTCATTATGATGCCTGCATTA 62480 Query 17429 AAAAATATTATTCAGATGCAGTTAACAGGCATTCCATTAGACATGGAAGAAGTATTAAAA 17488 || ||||||||||| |||||||||||||| | ||||| || |||||||||| |||| Sbjct 62479 AAGAATATTATTCAAATGCAGTTAACAGGTTTGCCATTGGATATGGAAGAAG--TTAAGC 62422 Query 17489 GTAGAGAAGATACTAATTAA--GGAAAAAGTAACT----TTT---TACC--AAGAGATGC 17537 | || || || |||||| | || || || ||| ||| |||| || Sbjct 62421 G-AGTTAATGAAC-AATTAACTGCTGAACGTGACGGCTATTTGGATACGTTAAGAAATAG 62364 Query 17538 TTAAATTCTCAGTTA-TTACTGATTTG--GTTCATA-GCGTG--CGTAAACGCAAGTGTG 17591 || ||| ||| |||| ||| | ||| |||| |||||| ||| | || Sbjct 62363 TT----TCTTGGTTCCTTACC---TTGAAGAAAATATGCGTATTCGTAAA-GCATATCTG 62312 Query 17592 AGAAGAAGAATGCTTCTCTTAAAACTAAGCAGGTGACTGTAGAAGACTTTGATGATCAGT 17651 | | || || | || ||| | || || ||| || | ||| ||| ||| Sbjct 62311 GCCA--ATAACCGTTAT---AAGGTTAAACGTGTTACACCAGAGGATTATGACGATAAGT 62257 Query 17652 TTAATCCAGATAGTCCTCTCCAATTGCAAGAACTGTTGTATGACATTATGGGGCTTCC-T 17710 ||||||| | ||| | | || |||||||| ||||| |||||| ||| || |||| | Sbjct 62256 TTAATCCTAACAGTGCAATTCAGTTGCAAGAGCTGTTATATGAC-TTAGCTGGTTTCCCT 62198 Query 17711 GTAATAGATTTGACAGATACTAAAGCTCCGGCAACTGGTGCAGA--------AACCATGG 17762 ||||| || || | || ||||| || || || | ||| || ||| || | Sbjct 62197 GTAATCGACCGAACCAAGACCAAAGCACCTGCCACAGATGCTGAGTCGCTGGAACGATTG 62138 Query 17763 AAAAACTTAAGTTTAAAGTTAAAACTCCTGAACATGCTGAGTTATTGGATTTACTTATTA 17822 ||||||| | | ||| || || | || ||| ||| | ||| |||||| Sbjct 62137 AAAAACT-ACGC---AAGAGAA----CCATATCAGCTTGAATTAATTGATGCTCTTATTT 62086 Query 17823 AATTTAGTAAAGTTAATAAGATAATCACGTCATTTATTCCTGCATTCAAGGCTGCACCTA 17882 || | ||||||| |||| ||| | || || ||||| ||||| ||| | ||||| Sbjct 62085 CATATTCTAAAGTTGATAAAATATTAACCTCGTTTATCCCTGCGTTCCTTGAAGCACCAC 62026 Query 17883 AAGCAGAAGATGGTTGGCATTATTTGTTTGGTTTCTTCAATTTAGGGGGAACAGTATCAG 17942 |||| || ||||| |||||||| ||||| || | ||||| ||||| ||||| || | Sbjct 62025 AAGCTGAGGATGGATGGCATTACTTGTTCGGATATTTCAACTTAGGTGGAACCAAGTCTG 61966 Query 17943 GAAGACT---TTCATCAAGTAATCCAAACTTACAGCAAATACCTTCAAGTAAATCTCCGT 17999 | ||| | |||||| ||| || |||||||| | || || ||||| ||||| Sbjct 61965 GTAGATTGAGTTCATC---TAACCCGAACTTACAAAACATCCCATCAAGCCGTAGTCCGT 61909 Query 18000 ACTCAAAAGTAATCAAAAAATGTTTTAGAGCACCTAAAGGTTTTCTATTTGTTGGGTTAG 18059 || |||||||||||| || ||||||||||| ||||| | || ||| ||| ||| Sbjct 61908 ACAGTAAAGTAATCAAACGTTGCTTTAGAGCACCGAAAGGCTGGCTGTTTACTGGACTAG 61849 Query 18060 ATTTTGCTTCATTAGAAGACAGAATATCTGCGGTTACTACCAAAGATTCCAACAAATTGA 18119 | |||| | | |||||||||||||| || | || || ||||| | || ||| | | Sbjct 61848 ACTTTGATAGTCTTGAAGACAGAATATCCGCTTTAACCACTAAAGACCCTAATAAACTTA 61789 Query 18120 AAGTGTATACCGATGGGTATGACGGGCACTGTTTACGTGCTTATGCGTACTTTAAAGATG 18179 | |||||||| ||||| ||||| || |||||||| ||||||| ||||| ||||| Sbjct 61788 AGGTGTATACAGATGGTTATGATGGACACTGTTTGCGTGCTTTCTATTACTTCAAAGACC 61729 Query 18180 AAATGCCAGACATTATTAACACAGTGGAAAGCATTAATAGCATCGAAGGTAAATATAAAG 18239 |||||||| ||| || | || || || || ||||| || |||| | ||||| | Sbjct 61728 GTATGCCAGATATTGTTGAAACTGTAGATAGTATTAACAGTATCGCTGACAAATACCCTG 61669 Query 18240 ATATACGTCAAAAAAGTAAAACTCCAACATTC 18271 || || ||| | ||||| | || |||||| Sbjct 61668 ATGAGCGACAAGATAGTAAGTCACCTACATTC 61637 Score = 269 bits (298), Expect = 1e-67 Identities = 848/1294 (66%), Gaps = 50/1294 (4%) Strand=Plus/Minus Query 53113 ATGGTTTAACAGGATTCATTAACGGAAGCATAGAAATTGTATCGATACAGTCGTCATGTT 53172 ||||||||| | | |||||| || | ||| |||| |||| | | || ||||| | Sbjct 23076 ATGGTTTAATTGCTTCCATTAAAGGCAACATTGAAACGTTATCTAAAGCATCATCATGCT 23017 Query 53173 TTGATTTAAACCCGCCAACCATAGCCATAGACAATTCTTCCAACATTTCTACCATCAGTG 53232 | ||||| || || ||| ||| ||||| | ||| ||||||| ||| ||||| ||| Sbjct 23016 TAGATTTGAAACCACCATACATTGCCATGCGGAGTTCATCCAACAGTTCAACCATGAGTT 22957 Query 53233 GAGTATCTTTC---ATTTCGATAGGGAAATGAATCTTACCTAATTTAAATAATGGCAATG 53289 | ||| | || || |||| || ||||| || ||| ||||||| | Sbjct 22956 ---TCTCTGTGGAAATCTCTTTAGGAAAGAATATCTTTCCAGTAGCAAACAATGGCACAG 22900 Query 53290 CCATTAAGAAACGAGTCATTTTATCAGAAGCAGGGCGAATACCTGGCTGTTTGCTATTAT 53349 |||| | ||| |||| |||||| | |||| | ||| || || | ||| | | || Sbjct 22899 CCATCTTCATACGTGTCAGTTTATCTGTCACAGGTCTAATGCCCGGTTCTTTACGACTAC 22840 Query 53350 TCGATGAAGCGAGTTGAAACCATATACTACGGAGCATCATCTCT----CTCT--GTATT- 53402 || || | ||| ||| || | |||||||| |||| |||| Sbjct 22839 CAGAGCGTGCAAAGGAAAAGTATA------GGTTCCTCATCTCTTGTTCTCTACGTATCC 22786 Query 53403 -AGTGATATAAACCCTGCCTGCTGACCGGATACTTCCACACCGGCAGACTGCACATTATA 53461 | | || || | || |||||||| | |||||| ||||| ||||||| ||||| Sbjct 22785 AACTAATGAAACCACTT--TGCTGACCTGTTACTTCTACACCAACAGACTGTGGGTTATA 22728 Query 53462 TGCTGGAACCAATCTGAATAACTCATCAAA-----CGCCACATCGATAGTAGCTTTGGCA 53516 | |||||| ||||||||| |||| || || | |||| | || ||| ||| Sbjct 22727 AATTTGAACCAGTCTGAATAAATCATTAAGGTTAGCGTC-CATCTCTTGTTTCTT--GCA 22671 Query 53517 CACCAACCATCTACCAGATACCAATCTCCTTGTGAGCTATACGCCCACACTGGTATAACG 53576 | ||||||||||| ||||||| ||||| || ||||||||| || |||| | Sbjct 22670 AAT--ACCATCTACCAAGTACCAATTACCTTGATAGTCATACGCCCAAACA---ATAATG 22616 Query 53577 GAAAAGTCGTTTAC---CTGTTTACCACCTACAGAGAAGTCAGAAGTGCTATAGAAAGTG 53633 | || || | || |||| | |||| ||||| | || | || || Sbjct 22615 ACACTGTAGTCAGCACTCTCTTTAGAAGAGACAGCAAAGTCTGTGGTAATGTAATAATGA 22556 Query 53634 TAATTTTGCGGATTAGTCATTAAATCCTTTCTGGAATACCACTTTATTTCATTG-TCCTG 53692 ||||| || | ||||| | || | | || || ||| ||| ||| || || Sbjct 22555 TAATTCTGTAACTGTGTCATGAGATTTGTACGAGAGTAATACTGTATC-CATGACTCTTG 22497 Query 53693 AATTAATTTATCTTCATCAGAGGCGATACGTAACATGTATTCCTGATAGAATGCAGCAAG 53752 ||| | | | |||||||||||||| ||||||||||| ||| || | |||| || Sbjct 22496 AATCATTCTCTCTTCATCAGAGGCAATACGTAACATAAGTTCTTGGTTAAATGATTTAA- 22438 Query 53753 TTTACCCTGCTCTAA-AGCAAACTCATACTCTCTCTTAACGAAAGAGTACGGGAACCGGT 53811 || ||| | ||| | ||| |||||||||| |||||||| || |||| ||| || | Sbjct 22437 TTCGCCCAGTTCTCACAGCCAACTCATACTGGCTCTTAACAAATTCATACGAGAATCGCT 22378 Query 53812 CTTCCCATGCGCCTTTAAATTCTTTTTCCTCACAAGGGAATTTCTCACAAAGTGGGTATA 53871 | |||||| || |||||| | ||| ||||||||||| |||||| | ||||| | Sbjct 22377 CAGGCCATGCACCAACAAATTCATGTTCTTCACAAGGGAAGCGCTCACAGATAGGGTAAA 22318 Query 53872 CGTTAACTACCCATGCTCCGGATTCAACCGCTTCATATAAAATATCTCGCTTATTAAATG 53931 ||||||| ||| | || || ||||| || ||||||| || ||| ||||||||| | Sbjct 22317 CGTTAACGTACCAACCGCCTGACTCAACGGCCTCATATAGAACATCATTCTTATTAAAAG 22258 Query 53932 GAGTACCGTTGAATATAACCTTACGCTTAAGCGGACTTAATGCAGGTAGTACGCCTTTAT 53991 | ||||| || || | || ||| ||| || | ||| | || || |||| Sbjct 22257 GCGTACCATTAAAGACAATCTTTTTCTTTGTTGGGTCAAGGGCATGGTCAACACCGTTAT 22198 Query 53992 ACACAGTGTCATTGATGGTAGCCATAGATGCCTTAGAGTTAGCATCCTCATCACTTACCA 54051 |||||||||| || || | |||| || ||||| ||||||||||| ||||| || | Sbjct 22197 ACACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGACTTAGCATCCTCGTCACTCACTA 22138 Query 54052 GATCATCCAGTACTGCTAATACAGGTCGTTTACCAAATATTTTGGAACCACGAATACCAG 54111 ||||| ||||| || | ||| || |||||| | ||||| |||||| ||||| | Sbjct 22137 AGTCATCAAGTACAGCCAGGGTAGGACGCTTACCATACATTTTATTACCACGGATACCTG 22078 Query 54112 TCTTAGCACCAAACATCTTCAAGCCAAACTTATTACCTTCCTGATTCACAAACTCAATAT 54171 ||||||||||||||| || |||||||||| ||| || |||||| ||||||||| Sbjct 22077 TCTTAGCACCAAACAAACCTAATCCAAACTTATGACCATCAGCATTCACGAACTCAATAC 22018 Query 54172 AGTTATCTGTAAATTTATATTGAGGAATCATATTGAGAAGGAAGTCAG---ATGAATGGA 54228 ||||| ||||| || || | | || ||||| ||| | || | | Sbjct 22017 GCTTATCCGTAAACTTCGCCACGGGCACGAATTTCTGAAGG--GTCTGGCTTTGTA-AGT 21961 Query 54229 ATCTATGCTCCATATTCTTACGTAAGTTCTTAACACCGTTATCCATAGAGTCACTTACGT 54288 |||| | || | ||||| | || |||||| | ||||| ||||| |||||| || | Sbjct 21960 ATCTGTTTTCTAAGTTCTTTCTTAGGTTCTTGGCTCCGTTGTCCATTGAGTCAGCGACAT 21901 Query 54289 AGATAGCACCCGGTACTGAACCAAAATTAGGCAAGTCTCC-GAATACGCCGATGTATAAA 54347 | || ||| | | || |||||| | | || || || ||| | || |||||| Sbjct 21900 ACATGGCAACATGCACCTTACCAAACCCATCAATTTCACCAAAACACG-CAATATATAAA 21842 Query 54348 AACAGGTATTCAGCAAATACGGTAGTCTTTGCCA 54381 |||| || |||||||||| || || || |||| Sbjct 21841 AACAAATACTCAGCAAATAGTGTGGTTTTAGCCA 21808 Score = 145 bits (160), Expect = 3e-30 Identities = 436/660 (66%), Gaps = 31/660 (5%) Strand=Plus/Minus Query 22039 AAAAACTCAGAATGATACACCGTTATTTTTCCGGGTTCAGGTAGCGTATTTTTTGGCTAA 22098 || |||||||||||||| | || |||||||| ||||||| || || ||| ||| ||| Sbjct 57307 AAGAACTCAGAATGATAACTCATTGTTTTTCCGTATTCAGGTTGCTTACTTTATGGGTAA 57248 Query 22099 AGTGGCAGCAAGTATGCGAACCACAATTGATACGTTGGAT---CGCGGTTCTCTGCCTGT 22155 || ||||| | |||| || | ||||| | || | || ||| | | || | Sbjct 57247 GGTAGCAGCCACTATGAATACAAAAATTG---CATTAAAAACACGGGGTATTTTACCGAT 57191 Query 22156 CAACGTGTATGCTATTAACTTAGCTCCATCCGGATTTGGTAAAGGCCATTCAACCAATAT 22215 || || ||||| |||||||| |||||||| || ||||||||||| ||||| || || || Sbjct 57190 AAATGTTTATGCAATTAACTTGGCTCCATCGGGTTTTGGTAAAGGACATTCGACTAAAAT 57131 Query 22216 TATCGAAGAACAGATTATTAATCAGTTCCGGTATAATTTTACTCAGCATACATTCCCTGC 22275 ||| || | || |||| || || | ||||| | | ||||| || | Sbjct 57130 TATTGAGTCGGAAATCCTTAACGGCTTTCGTAAACGTTTTATGGATGAAACATTTCCAG- 57072 Query 22276 TATCT-CAG-ACCAGAGTCTGCAAAAGATTGCCTCAGTA-CGAGCG-------CAGCGTG 22325 ||| | || | | | | | | ||| || || | | || || ||| ||| Sbjct 57071 TATGTGCATTAGCTAACTTAG--ATAGACTGGCTATGCATCGTGCAAATAAAACAG-GTG 57015 Query 22326 ATGGCACTGACTATGATGATGAACTTGTTGCTGTACAGAAAGAGTTTAATTCTCTTGGTT 22385 | ||| | |||||||| || ||| ||||||||||| || || |||| Sbjct 57014 AA---ACT---TTTGATGATGCTCTCACGGCTTATCAGAAAGAGTTCAAGACTGCTGGTA 56961 Query 22386 CATTATTATTTTCATTCAGTGAAGGTACATCTCCGGCTGTTAAGCAAATGCGACATAAAG 22445 || | | || || ||| | || || || || || |||||||| |||| || Sbjct 56960 AATACCTTTACTCGTTTGATGAGGCAACCCAACCTGCCGTGAAACAAATGCGTCATACAG 56901 Query 22446 TGCTTATGGCTGAGTGCGGTGCAATTAACTTTGAAATGGATGAAATGGGTTCTAACTTA- 22504 | | | || | || ||||| | || ||||| | ||||| || ||||| ||| | Sbjct 56900 TTTTACTAGCCGGATGTGGTGCGCTAAATCTTGAAGTCGATGAGATTGGTTCAAACATCC 56841 Query 22505 ATGGGTAACATTGAAGTTTTAACCACATTTTTAGAATTGTACGATGTAGGCAAAGTGAAA 22564 | | || ||||| | ||| |||||| | ||||| || || ||||| ||| ||| Sbjct 56840 AAAAGCAA-ATTGATGCGTTAGGCACATTCCTTGAATTATATGACGTAGGGTTAGTTAAA 56782 Query 22565 GCTAAACTTACTAAAAACACTTCTGAATCCAAACGTAGTGAAGAAATTGACGGGCGTTCA 22624 ||||||| || |||||||||||||| | ||||| |||||| |||||||| | || Sbjct 56781 CCTAAACTAACAAAAAACACTTCTGACAGTACACGTAATGAAGATATTGACGGAAGAACA 56722 Query 22625 CCTACCAATATGCTGTTATTTGGTACTCCGGCTAAACTGCTTAATGGCGGTGCTGAAGAA 22684 || | |||||| || | || || ||||||||||| ||||||| |||| |||||||| Sbjct 56721 CCAGCTAATATGTTGATGTTCGGAACTCCGGCTAACTTGCTTAA---CGGTTCTGAAGAA 56665 Score = 131 bits (144), Expect = 6e-26 Identities = 253/373 (68%), Gaps = 3/373 (1%) Strand=Plus/Minus Query 1348 CTTATCCTGAAAAACAATCATCATGATGGTGATATAGCTCTGGATTCTATCAACAAGTTT 1407 ||||||||||| || ||||| ||||| |||||||| | | ||| | ||| | Sbjct 10988 CTTATCCTGAAGAAGAATCACCATGAAGGTGATATTTGTTTAGATAACTTAAACCGTATG 10929 Query 1408 AACTCTATTCCATTGGCTCTCAATGAACGTGTCATACGCAACATCAGAGACACCAGAAAG 1467 ||| |||||||| | | ||||| | || ||||| || || |||| | | || Sbjct 10928 AACAGTATTCCATACAGTATTGATGAAAGGGTAATACGTAATATTCGAGATAATTGTGAG 10869 Query 1468 AGTTTATCCAAGCCAAAGGAAGATGAGTCTATCGAAGACTGGAAAGAGCGTGTAGCGGAC 1527 |||||| || || ||||| || ||||| ||| | | || || | ||| Sbjct 10868 CATTTATCTTCACCTAAACGTGATGAAACTCAGGAAGATTGGGATAAACGAGTTGAAGAC 10809 Query 1528 TTTGAGCGCATGGAAAAGGAATCTATGAACGTGTTTGCAGTTATGATTAATAACGGTAAC 1587 ||| | || |||||| || || ||| | |||||||| | ||||||||| | ||||| Sbjct 10808 TTTAAACGTATGGAACGTGAGTCAATGCAAGTGTTTGCCTTAATGATTAATGAAGGTAAT 10749 Query 1588 AGATTCTATCTTACCCATAAAGTTGATAAACGTGGGAGGACTTATGCACAGGGTTATCAC 1647 | |||||| | ||||| | |||||||||||| | ||||||| | |||||||| Sbjct 10748 CGCTTCTATTTAGGCCATAGACCTGATAAACGTGGACGTACTTATGATGATGGTTATCAT 10689 Query 1648 ATATCTTATCAAGGAAATACTTATCGCAAGGCTGTAATAGAATTAGCAGATAAGGAATTG 1707 || | ||||||| || |||||| || ||| | || |||||| ||| |||||| Sbjct 10688 ATCAATAATCAAGGTAACTGTTATCGTAAAGCTATTATGAGATTAGCTGATGAGGAAT-- 10631 Query 1708 ATAGATGAATAAT 1720 ||| |||||||| Sbjct 10630 -TAGTTGAATAAT 10619 Score = 122 bits (134), Expect = 3e-23 Identities = 270/398 (68%), Gaps = 13/398 (3%) Strand=Plus/Minus Query 22961 GACCATGAAGAAATTCGTAAAGCAGAGATATCTCACCGGTACTTTAAAGCTCTCAAACTG 23020 || ||||||||||| |||||||| || | || || ||||| || || | ||| | Sbjct 56376 GAGCATGAAGAAATCTTAAAAGCAGAAATGGCCCATCGTTACTTCAAGACTATTAAATTA 56317 Query 23021 GCAGGTGCATACGCATTCGTTG---ATGAAAGCCCTGAAGTAACGATAGACCATATCTAC 23077 |||||||| |||||||| ||| | ||| || ||||| | ||| || ||| | | Sbjct 56316 GCAGGTGCTTACGCATTTATTGCACAGGAA---CCAGAAGTGAAGATGGAGCATTTGCAT 56260 Query 23078 TCAGCTATTAAGCTGACAGAAGATTGTGGTGAAGCTTTTAAAAAGATTCTTAATCGTGAA 23137 || |||||| ||| ||||| | |||||||| ||||| || | |||||||| Sbjct 56259 TCTGCTATTGCGCTTGTGGAAGAATCAGGTGAAGCGCTTAAAGCAATCATGAATCGTGAT 56200 Query 23138 AAAGCTCACATGAAGCTGGC-ACGTTATATCGCTGAAATTGGACGTGATGTGACTAATGC 23196 ||| || || |||| | || | ||| | | || | |||| |||||||| ||||| || Sbjct 56199 AAACCTTACGAGAAGTTAGCGAAGTT-TGTTGCAACAGTTGGCCGTGATGTTACTAACGC 56141 Query 23197 TGATATGGTAGAAGATTTACCATTCTATCCTAATACA---GCAGCCAGAAAGAATGAAAT 23253 ||| | || || | |||| |||| | || || | ||||| || ||| | Sbjct 56140 TGACTTTGTTGACAAACTACCTTTCTTTAAGAAAGCAAGTGGAGCCATGAAACGTGAGTT 56081 Query 23254 GATGAACCTTGCTCGTGCATGGGGATATAAAAACAATATCATCATCAAGTCTCATATTGA 23313 ||| || |||||||| ||||| ||| || || || || ||||| ||| Sbjct 56080 AATGTCTCTGGCTCGTGCTTGGGGTTATGGTAATAACATTATTATCAAACAATATACACG 56021 Query 23314 AGAAGGTATTGAATTCTATTCA-GGTGAAACTCTGGAA 23350 |||||| ||||| |||| |||| |||||||| |||||| Sbjct 56020 AGAAGGGATTGACTTCT-TTCACGGTGAAACACTGGAA 55984 Score = 95.1 bits (104), Expect = 5e-15 Identities = 317/483 (66%), Gaps = 18/483 (4%) Strand=Plus/Minus Query 43543 CAGATCATCAAAAGAAAC--CAGAGATGGAGTA--GCACCTTCACCAGTTACTTCAGAGT 43598 ||||| ||| ||| ||| ||||||| || |||||||||||||| | |||| | Sbjct 34740 CAGATTCTCATAAGTAACTTCAGAGAT----TACCGCACCTTCACCAGTGATTTCATCAT 34685 Query 43599 CTTTAGTAGCAGCACCTGCATACATGACAACACCAGCACCATTCAGTAGATCAATTTGAA 43658 |||| || |||| ||| |||||| | ||||||||| | | | ||||||| | Sbjct 34684 CTTTCAATGCCACACCAGCAAACATGATAGTACCAGCACCTTGTAACAACTCAATTTCGA 34625 Query 43659 GC-TGTGCTTCATACATCTGAGCAGCACCCTGAATTGC---TTCACGACGCATATGCTG- 43713 || ||| ||||| || || | ||||| || || | |||||| ||||||| | Sbjct 34624 GCATGT-CTTCAGTGATTTGTACCGCACC-TG--TTACCAGTTCACGCTGCATATGTTTC 34569 Query 43714 ATGAAGTTCTGCATCAGAGTCAAAATCCATGGATTCACGGGAGAATTCATAGAAGAAACC 43773 || | || | |||| ||||| || || || || | | ||| ||||| ||| Sbjct 34568 ATCAGCATCGGG-TCAGTATCAAAGTCGATAGAGTCTTTAGTCCACTCACGGAAGATACC 34510 Query 43774 CATCTTATGCATGGAGCCTTCAATAACTTTACGGGTGAAACCAACACGGTTAACACGACC 43833 ||| ||| ||||| |||| || | |||| ||||||||||||||||||||| Sbjct 34509 CATTTTAGAAATGGAACCTTTGATTTCCAGACGGACAGTACCAACACGGTTAACACGACC 34450 Query 43834 ACCGGTTTCAGACAGGGTAGGCAGTTTGCTTGAGATAGTACCTACGTCACGACTTGAACC 43893 ||| |||| || | |||| ||| ||| |||| ||||| | ||||| Sbjct 34449 ACCTTCTTCACCCATGTACGGCATTTTATCAAGGATTTTACCAACGTCTTTAGAAGAACC 34390 Query 43894 ATAGATATTACCATTAGCGTACTGTGCGCCTTTAGCATCAATACCCTGATCGTTGACGTT 43953 || | ||||||| | | |||| |||||| ||||| || ||||| ||||| Sbjct 34389 GTATAAGTTACCATCTTTGATTTTAACGCCAGAAGCATCGATACCTTGGTCGTTCACGTT 34330 Query 43954 CAGATCGCTCAGTAAAGGCATATAGTGATAAGCCTTAATAGTCTTACCAAAATGCTTAGG 44013 | || ||| || || || ||||| ||||| || ||||| | ||||||||| Sbjct 34329 ACGGTCATCCAGCAATGGAATGTAGTGGTAAGCAACGATTTCTTTACCCATATGCTTAGG 34270 Query 44014 CAT 44016 ||| Sbjct 34269 CAT 34267 Score = 84.2 bits (92), Expect = 8e-12 Identities = 153/224 (68%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 46193 GCATCGTTAGTAATACGTATGATTTCCTCATCGGTAAGGAATTCCTGATTCATGGCAATA 46252 || || ||||| | ||| |||| ||||||||| | | |||| | |||||| || ||| Sbjct 31868 GCCTCATTAGTTACACGAATGACTTCCTCATCAGATAAGAATACAGCATTCATTGCCATA 31809 Query 46253 ATCATACGGCCTAAATCTACCATACCTTTTTTCAGTCTACGCAGAATAGACATCTCACGT 46312 ||| | |||| | | | | ||||| || |||||||| | |||||| Sbjct 31808 ATCTTTGCACCTACTCGTGCAAGTGTATGAGAGAGTCTGCGTAGAATAGATACTTCACGT 31749 Query 46313 TTAGATGATGCATCCAATACACCTCTGATACCGGCTGCAACGTCACCTAATGAACCAGAA 46372 | || ||||| || ||||| | || || | ||| || || ||||||||||||| | Sbjct 31748 CGGGCTGCAGCATCTAACGCACCTTTAATGCCCGTTGCTACATCGCCTAATGAACCAGCA 31689 Query 46373 CTAATACCTTCAGAGAATGCCTTAACTCCGGATAAAGACTCTGC 46416 ||||||||||| ||||||||| | || || | ||||| || Sbjct 31688 TTAATACCTTCACCGAATGCCTTGATACCTGACATTGACTCAGC 31645 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 188930556720052