Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1348 131 3e-25 >seq1348 Length=1847788 Score = 131 bits (144), Expect = 3e-25 Identities = 422/649 (65%), Gaps = 7/649 (1%) Strand=Plus/Plus Query 221699 TTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGTTGGTATACTGTATG 221758 || ||||||| | ||||| ||||| || || | ||| || | | ||| | || Sbjct 1699065 TTAAGGGCAATGGAGGCCAAATTACAAACAGCTATCTCATCAGGGGCAGAATATTCTACA 1699124 Query 221759 ATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGA 221818 |||||||| || | |||||||||||| ||||| || | || | || || ||||| Sbjct 1699125 ATCTCTGTGCATAAGTTGCTGCACTTAATGGTGCCAATGTTTTGCTGGTTGCTTTTGCGG 1699184 Query 221819 TTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATC 221878 ||| ||| || ||||| | |||| |||| || || || | ||||| | | || Sbjct 1699185 TTGCAAGCATCTTTGTACAACATATAGGGTGTACCGGTTTCAACTTGAGCTTCAATTATA 1699244 Query 221879 TTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATA 221937 ||| || | ||| || | || || | ||| || || || |||||||| Sbjct 1699245 GCAAACCAAAGAGC-CTGAGCTTTGACGGTGCGATTGGCTTTTCCTTCT---TTTTCATA 1699300 Query 221938 CCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGC 221997 | |||||| | || |||| ||||| | | || | ||| || ||||| || Sbjct 1699301 CTTGGTATACAATTCTTCGAACTCCTCACCCCAAACATCCTGCAGACCGGGACATTTGTG 1699360 Query 221998 GGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGAT 222057 |||||||| || ||||| || |||| || | | ||| || | ||| || || Sbjct 1699361 TGGACACATTAGGGACCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTAT 1699420 Query 222058 CCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAG 222117 |||||| || | || |||||||||| | ||||| ||| |||| | |||||| | | Sbjct 1699421 CCACAGAGCATAGAAAAGATCTCTGGCTCTATGCTCTTCCTTGCCGGTATTTTTCTTTAA 1699480 Query 222118 ATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGG 222177 ||||||||| |||||||| || | ||||| ||||||| ||| | || | || || || Sbjct 1699481 ATCCAAAAATTCAAAAATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGG 1699540 Query 222178 TCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAGATGCGAAGGGTCGG 222237 || ||| ||||||||||| || | | | | ||| || | | || | || Sbjct 1699541 GCGTTTGCCACCACCCTGATCAACATAGCGGGCTACATTGTTAAACACCCTGAGCATTGG 1699600 Query 222238 TACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT 222297 |||||| || || || ||||| ||||| | |||| | | || |||||| | | Sbjct 1699601 TACCAGACCATTTGAGGTGCCGTTTGTGCCGTCAATGGAAGTGCCCTTGGCCCTTATG-C 1699659 Query 222298 ACTG-GCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCA 222345 | || | ||||| |||||||| || ||| || |||||||| || Sbjct 1699660 AGTGTACGTTTATGCCAATACCACCCGCCGATTTGGATATCATGGCACA 1699708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928824911110720