Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq165 147 6e-31 seq1596 127 5e-25 >seq165 Length=448888 Score = 147 bits (162), Expect = 6e-31 Identities = 244/351 (70%), Gaps = 6/351 (2%) Strand=Plus/Plus Query 4173 GCCACCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATC 4232 ||| || | ||||||||| | || |||| || | ||||| || ||| | | ||| Sbjct 55448 GCCGCCTAACATTTGCATTGAACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATC 55507 Query 4233 CTGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGA 4292 || || |||||||| ||||| || | ||| |||| ||||||| ||||| | || Sbjct 55508 TTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGA 55567 Query 4293 GCCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTG 4352 ||||||| ||||||||||| |||| ||| || | ||| ||| || || || ||||| Sbjct 55568 GCCTTTTTTCAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTG 55627 Query 4353 CCACTCCGTCTGCTC---CTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGT 4409 ||| || || | || | || || || ||||||||||| ||||| ||| || || Sbjct 55628 CCATTCGGTTTTTTCACGCATT---TCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGT 55684 Query 4410 AGCAACTGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATG 4469 || | || |||||||| | || || || || | |||||| ||||| || Sbjct 55685 TGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTG 55744 Query 4470 CCCAAGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCATTTA 4520 ||| | | ||| |||| || || ||||||||||||||||| |||||||| Sbjct 55745 CCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCTGCTGGCCATTTA 55795 >seq1596 Length=248270 Score = 127 bits (140), Expect = 5e-25 Identities = 168/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 2163 TCAATCAGGTTTTCTGTAGGGATGTACTGGCAATCAACGTGCCACACTGCCATTGTATCC 2222 ||||| | | |||| | || |||||||||||||||||||| | | || | || Sbjct 113502 TCAATTACGGTTTCGTTTGGTATGTACTGGCAATCAACGTGATATTCAGCAAGTGATAGA 113443 Query 2223 ACACTATCGGCACAAACAGGCTGATCTATATCTCGCCCACAATTCCAGGCTTTTTGGGCT 2282 || || || | | |||||||| || ||| || ||| | ||| || ||||| || Sbjct 113442 ACGCTTTCAGTGGATACAGGCTGGTCAATACTTCTCCCGTGCTCCCACGCCTTTTGCGCC 113383 Query 2283 TCTTCCAGCGTGTAAACATGAGCGCGATCGATATCAGAACTGTAACCATTGCCGTTATGG 2342 |||||||| ||||| || ||||| ||||||||||| ||||| ||||||| | | Sbjct 113382 TCTTCCAGAGTGTATACGTGAGCCTTATCGATATCAGTGGCATAACCTTTGCCGTCCTTG 113323 Query 2343 CAATGGAATGAAGCGTTATTACCCACAGTTTCACGCGAGCACATCATGTAAAA 2395 ||||| ||||| ||||| | ||||| ||||| || | ||| ||||||||||| Sbjct 113322 CAATGAAATGATGCGTTGCTCCCCACCGTTTCGCGGGTGCATATCATGTAAAA 113270 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126743021756848