Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019514.1 Length=74669 Score E Sequences producing significant alignments: (Bits) Value seq410 138 5e-28 >seq410 Length=72445 Score = 138 bits (152), Expect = 5e-28 Identities = 183/254 (72%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 55231 CCAACACGGTTCACACGGCCACCGGTTTCAGTCAGCGTTGGGATTTTACCAACGATGGTG 55290 ||||||||||| ||||| ||||| |||| || || |||||| ||| ||| | Sbjct 34469 CCAACACGGTTAACACGACCACCTTCTTCACCCATGTACGGCATTTTATCAAGGATTTTA 34410 Query 55291 CCGATGTCTTTGCTTGAACCATACAGGTTCCCGTTAACGATGGTTGCGCCTGCAGCATCG 55350 || | |||||| ||||| || | ||| || | ||| | |||| | ||||||| Sbjct 34409 CCAACGTCTTTAGAAGAACCGTATAAGTTACCATCTTTGATTTTAACGCCAGAAGCATCG 34350 Query 55351 ATACCCTGGTCGTTTACGTTACGGTCATCCAGCAGTGGGATGTAGTGGTAAACGCGGATT 55410 ||||| |||||||| ||||||||||||||||||| ||| |||||||||||| | |||| Sbjct 34349 ATACCTTGGTCGTTCACGTTACGGTCATCCAGCAATGGAATGTAGTGGTAAGCAACGATT 34290 Query 55411 TCTTTGCCGTAGTTCTTAGGCATAGAAACAACGTCTGCCAGCGGCATAAAGTATTGGTCT 55470 ||||| || | ||||||||||| || || || | | | || || ||| ||| Sbjct 34289 TCTTTACCCATATGCTTAGGCATAGTCTCAGTATCAGCTAACTGAGTATAGATTTGCTCT 34230 Query 55471 TTACGCGCTTCAAT 55484 ||||| || ||||| Sbjct 34229 TTACGAGCATCAAT 34216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238811014193590