Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019543.1 Length=160646 Score E Sequences producing significant alignments: (Bits) Value seq253 96.9 4e-15 >seq253 Length=360942 Score = 96.9 bits (106), Expect = 4e-15 Identities = 250/374 (67%), Gaps = 8/374 (2%) Strand=Plus/Plus Query 36753 ACCAAGATACCCACAAACTCTTCGTATAACTGA--CATCTTTGACGAATCGTGGTTACCG 36810 ||| ||||| ||||| ||||| || || || || || ||| | || |||||||| Sbjct 104054 ACCTAGATAACCACACACTCTACGGATCACGGAGACACGGTTGGTG--TCATGGTTACCA 104111 Query 36811 CAGCTTGGACAACTAAATCCTTTCGAGGTGCATTTGAATTCACCGTCAAAACCACATTCA 36870 || | ||| || ||| ||||| ||| || || ||||||||| ||| ||||||||| Sbjct 104112 CAACGTGGGCACACAAAACCTTTACTGGTACAGTTAAATTCACCGGTAAATCCACATTCA 104171 Query 36871 TAACATTTATCGACCGGTGTGTTTGTTCCAAAATAGGAAAGATTTTCCATCGC-GTAATC 36929 ||||||| ||| | || ||||| |||||| |||| | | || | ||| || ||| || Sbjct 104172 TAACATTCATCAATAGGCGTGTTGGTTCCATAATAAGGTACATGCT-CATAGCTGTAGTC 104230 Query 36930 CCAAATTTGCTCAAGGGCCTCGAGATTGTTTCGCATATTGGGTAGTTCGACATAGCTGAT 36989 ||||| | ||||| || | | |||| | | || || ||| | |||| || Sbjct 104231 CCAAACGTCTTCAAGTGCTTTCAAGTTGTGCTGTAAGTTTGGATACTCGCCGTAGCAAAT 104290 Query 36990 ATGCCCACCTGATGCAATCCAATGGAATTCTTTTTCGGCATCTATTTTGTCATATGGGTT 37049 | || || ||| | | || || | ||| ||| || || || |||||||| Sbjct 104291 AAAACCGCCATTTGCGAGAGCAGGGTATGGCTGTTCAAAATCAATCTTATCGTATGGGTT 104350 Query 37050 CAACTCG-GCATCGACAGGAATATGGAAGCTATTTGTATACCAATCCTTGTCTGTAATTC 37108 ||| || || ||| || ||||| ||||| || || || | || || |||| | Sbjct 104351 -AACGCGTTTTTCAACATCAAGGTGGAAACTATTGGTGTAGTAACCTTTTTCCGTAACAC 104409 Query 37109 CTTCGATAACGCCA 37122 |||||||||| ||| Sbjct 104410 CTTCGATAACCCCA 104423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 513928195276880