Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_019716.1 Length=44510 Score E Sequences producing significant alignments: (Bits) Value seq1596 127 6e-25 >seq1596 Length=248270 Score = 127 bits (140), Expect = 6e-25 Identities = 335/501 (67%), Gaps = 18/501 (4%) Strand=Plus/Minus Query 35824 CCCATGAACTGAAGGAAGTGGGTGATCAGTGGCGCACGCCGGACAACATTTTCT-GGGGA 35882 ||||||||||||| ||| | |||||||| ||| |||| || | | || | | ||||| Sbjct 107788 CCCATGAACTGAAAGAAATTGGTGATCAATGGTGCACACCA-AGTGCTTTGTATTGGGGA 107730 Query 35883 ATTAACACCCTGTTTGGCCCGTTTGTTCTGGATCTGTTCACTGACGGTGATAACGCCAAA 35942 |||| | | | | || || |||||| |||| |||||||| | || || Sbjct 107729 ATTAGCTCAATATACGGGATTTTCAAACTGGATTTGTTTACTGACGGAAAAAATAGTAAG 107670 Query 35943 TGTGCCGCGTATTAC---ACGGCGGAAGACAACGCGCTGGCGCATGACTGGTC-AGAACG 35998 || | |||| | || || || || || || ||| |||| |||||||| | | | Sbjct 107669 ---GCTCCTTATTTCTATACTGCAGAGGATAATGCACTGACGCAGGACTGGTCCACTAAG 107613 Query 35999 CCTTGTGGAGCTTAAAGGTGCTGCCTTTGGTAATCCTCCATACAGCCGCGCCAGTCAGCA 36058 | | | ||| || || ||||| ||||| ||||| ||||| ||| ||| | Sbjct 107612 C-TGGCAGAGGTTGGCGGCGCTGCTTTTGGAAATCCGCCATATTCCCGT---AGTTCCTA 107557 Query 36059 TGAGGGGCAATA---CATCACCGGCATGCGTTACATCATGAAACATGCCAGTGCCATGCG 36115 | | | || | |||||| ||| | || |||| ||||| ||||| | ||||| Sbjct 107556 TCACGAAAAACAGCCCATCACTGGCGTTGGTCACATTATGAATCATGCAATGAAGATGCG 107497 Query 36116 TGATAAGGGCGGGCGCTATGTTTTCCTGATCAAAGCTGCCACCAGCGAAGTGTGGTGGCC 36175 || || || || |||||||| || | | |||||||| || |||||| |||||||| Sbjct 107496 AGAGAAAGGTGGTCGCTATGTGTTTTTACTAAAAGCTGCAACTAGCGAAACATGGTGGCC 107437 Query 36176 GGAAGATGCAGATCATATTGCTTTTATTCGCGGGCGTATTGGTTTTGAACTGCCTGTCTG 36235 || |||| |||||| || |||||||| || ||||||||||| || | || | || Sbjct 107436 TGAGCATGCTGATCATGTTTGCTTTATTCGTGGTCGTATTGGTTTCGATGTCCCCCTATG 107377 Query 36236 GTTTATCCC-GAAAGACGAGAAGCAGGTACCGACAGGAGCTTTTTTCGCTGGTGCTATTG 36294 ||||| ||| | || ||| || ||| || | || || || || || ||||| || | Sbjct 107376 GTTTAACCCAGTTAG-CGATAAACAGAAGCCAAGCGGTGCATTCTTTGCCGGTGCAATAG 107318 Query 36295 CTGTTTTTGACAAGACCTGGA 36315 ||||| || || || |||| Sbjct 107317 TCGTTTTCGATAAAACATGGA 107297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 142307505139632