Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq165 93.3 1e-14 >seq165 Length=448888 Score = 93.3 bits (102), Expect = 1e-14 Identities = 204/306 (67%), Gaps = 0/306 (0%) Strand=Plus/Plus Query 25771 ACCGCCAGGACCGACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCA 25830 ||||||| | ||||| | || || ||||| |||||||||| || | ||||| Sbjct 55469 ACCGCCAATATTAACAACCACTTCTGTGGTGTAACGATCTTGACCACTTTGATCTTGCCA 55528 Query 25831 CTTGCGCGTGCGCAACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCC 25890 ||| || || |||| ||||||||||||| | ||||||||| || ||||| Sbjct 55529 CTTACGTGTTTGCAAAGAACCTTCAATGTAAACTTGTGAGCCTTTTTTCAGATATTCGCC 55588 Query 25891 GGCCACCTCTGCCAACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGG 25950 || || || || || || ||| | | ||| ||||||||||| || |||||||| | Sbjct 55589 CGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTGCCATTCGGTTTTTTCACGCAT 55648 Query 25951 CTGCCCTGTCTGCTTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGC 26010 | || || ||||| || | ||| || || | ||| |||||||| || Sbjct 55649 TTCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCCACAGC 55708 Query 26011 GGTACCGTTAGGCATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTAC 26070 ||||||||||| || | | ||| || || || || ||||| |||| || ||||| Sbjct 55709 ACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTGCCCCAAGTTACCGATAAGAATTAC 55768 Query 26071 CTTGTT 26076 || || Sbjct 55769 TTTATT 55774 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123658284507464