Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020841.1 Length=40803 Score E Sequences producing significant alignments: (Bits) Value seq165 80.6 7e-11 >seq165 Length=448888 Score = 80.6 bits (88), Expect = 7e-11 Identities = 116/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 13037 AAAGAGTTTAATTGTCCAGTTATCGCACTGTCACAGCTTAACCGTAGCTTAGAGAGCCGA 13096 |||||||| ||| ||| || | || |||||||||||||||| ||||||||| || Sbjct 62082 AAAGAGTTGAATGTTCCGGTCGTTGCTTTGTCACAGCTTAACCGAAGCTTAGAGCAGCGT 62023 Query 13097 CCAAACAAACGGCCCATCATGAGCGACCTAAAAGAGTCAGGGGCCATTGAGGAAAACGCT 13156 || | ||||| || | | ||| || || ||||| | || ||| | | ||| Sbjct 62022 GCAGATAAACGCCCTGTGAACTCTGACTTACGTGAATCAGGCTCTATCGAGCAGGATGCT 61963 Query 13157 GACGTGATTATGTTCCTGTACCGCGATGAGGTTTATAACGAAAA 13200 ||| | |||||||| | || || |||||||||||| |||| || Sbjct 61962 GACCTTATTATGTTTATTTATCGTGATGAGGTTTATCACGATAA 61919 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 130445346443090