Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq1348 118 5e-22 >seq1348 Length=1847788 Score = 118 bits (130), Expect = 5e-22 Identities = 181/257 (70%), Gaps = 6/257 (2%) Strand=Plus/Plus Query 25906 CCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAA 25965 ||| ||| |||||| || || | |||||| || || || ||||||| ||||| || Sbjct 1699376 CCAGTCACCATTTTCTTCCACACGTTTCATAAACAAGTCGGGTATCCACAGAGCATAGAA 1699435 Query 25966 TAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAA 26025 | |||||| ||||| ||||| || ||| ||| || |||| ||| || || ||||| Sbjct 1699436 AAGATCTCTGGCTCTATGCTCTTCCTTGCCGGTATTTTTCTTTAAATCCAAAAATTCAAA 1699495 Query 26026 AATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACC 26085 ||||||||| ||||| || || ||||| |||||||| ||| | ||| || ||||| Sbjct 1699496 AATATCTGAATGCCAAGGCTCCAAATAAATAGCAAAGGCACCAGGGCGTTTGCCACCACC 1699555 Query 26086 TTGATCTACGTATCTTGCAGTTTCATTG---AAAACTTTCAACATTGGAACTAATCCAGT 26142 ||||| || || | || | ||||| || || | | |||||| || | ||| | Sbjct 1699556 CTGATCAACATAGCGGGC---TACATTGTTAAACACCCTGAGCATTGGTACCAGACCATT 1699612 Query 26143 TGAAAATCCGTTTGTGC 26159 ||| |||||||||| Sbjct 1699613 TGAGGTGCCGTTTGTGC 1699629 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253034717236475