Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1619 113 5e-20 >seq1619 Length=3001179 Score = 113 bits (124), Expect = 5e-20 Identities = 348/522 (67%), Gaps = 26/522 (5%) Strand=Plus/Plus Query 138183 ACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAGAATGTCTTATGT 138242 || ||||| ||||| | || ||||| ||||| ||||||||||||||||| || || || Sbjct 2321058 ACTCCAATTGGACCCATTCCTGGACCACCACCACCATGTGGAATACAGAAAGTTTTGTGC 2321117 Query 138243 AAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGACCTACCTGTGCA 138302 | ||||| || | ||||| ||||| |||| || ||| || || || ||| Sbjct 2321118 AGATTTAAGTGGGAAACATCACTTCCATAATCACCGGGGCGACATAGGCCCACTTGGGCA 2321177 Query 138303 TTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTC-ATGAA--CGATCTTACAT 138359 || | ||| || ||||| ||||| || || || ||| |||| ||||| ||| | || Sbjct 2321178 TTCATATTGGCGCCATCAAGATACACTTGGCCCCCA-TGTCTATGAATTAAATCGCAAAT 2321236 Query 138360 ATCTGTCTGATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAATCATAATACAT 138419 || | | | | || || ||||| || ||| || |||||||| ||||||| |||| Sbjct 2321237 GTCGGCC--ACGGTTTCCTCGAATACGCCCATAGTTGAGGGATATGTGATCATAAGACAT 2321294 Query 138420 G--AGAGTTCAAATGTATTCATGATTGCTTTCTTCTCTAGATCTTTGATGTCTATGTTGC 138477 | ||| | | | || ||| || ||| || | | || || || ||| | | Sbjct 2321295 GATAGATTACGAGCGTGCTCA-GA-TGCCTTATCACGCAAATGCGCCATATCAATGCTTC 2321352 Query 138478 CATC----ATCATCACACTTGACACCTACAACTTTCATTCCTGCCATGACTGCACT--AG 138531 |||| | || | ||| | ||||||||||||| ||||| ||| || | Sbjct 2321353 CATCTGCTAGAATACGAATTGGC----TCAACTTTCATTCCAGCCAT--CTGAGCTGATG 2321406 Query 138532 CAGGATTAGTTCCATGTGCTGACTCTGGTATCAGACATACATTTCTTTTATCATC-TCCT 138590 ||||||| |||||||| ||||| ||| || || || | ||| | | | | || | Sbjct 2321407 CAGGATTGGTTCCATGAGCTGAAATTGGAATTAGGCAAATATTGCGGTGACCCTCATTGC 2321466 Query 138591 GATCCTTGATGATATGCT-TGGATTGCTAACAGTCCTGCATACTCACCCTGTGATCCTGC 138649 | | || || || ||| | || ||| || || ||||| |||||||||| ||||| Sbjct 2321467 GGT-GTTCGTGGTA-GCTGCGTATAGCTCTTAGACCAGCATATTCACCCTGTGCTCCTGA 2321524 Query 138650 GTTAGGTTGTAATGATATAGAATCAAAACCTGTGATATCACA 138691 || || || || ||||| ||| |||||||||| ||||| Sbjct 2321525 ATTCGGCTGGAAGGATATTTTATCGTAACCTGTGATCTCACA 2321566 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578986002196760