Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1348 183 4e-41 seq583 82.4 9e-11 >seq1348 Length=1847788 Score = 183 bits (202), Expect = 4e-41 Identities = 598/915 (65%), Gaps = 27/915 (3%) Strand=Plus/Minus Query 75686 AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGT 75745 |||||||| || | | |||||||| || ||| | || ||||| || || || || | Sbjct 1699444 AGAGATCTTTTCTATGCTCTGTGGATACCCGACTTGTTTATGAAACGTGTGGAAGAAAAT 1699385 Query 75746 GGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAG 75805 ||| | ||||| || | |||||| |||| || ||||| || | ||||||| Sbjct 1699384 GGTGACTGGTCCCTAATGTGTCCACACAAATGTCCCGGTCTGCAGGATGTTTGGGGTGAG 1699325 Query 75806 GAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCA 75865 ||||| |||| | || || ||||||||| | || || | ||||||| || || | Sbjct 1699324 GAGTTCGAAGAATTGTATACCAAGTATGAAAAAGAAGGAAAAGCCAATCGCACCGTCAAA 1699265 Query 75866 GCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATG 75925 || | | ||||| ||||| | || | || || || || ||||| |||||| Sbjct 1699264 GCTCAGGCTCTTTGGTTTGCTATAATTGAAGCTCAAGTTGAAACCGGTACACCCTATATG 1699205 Query 75926 CTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGC 75985 | ||||| |||||||| ||| || || ||||| | || | || || || ||| || Sbjct 1699204 TTGTACAAAGATGCTTGCAACCGCAAAAGCAACCAGCAAAACATTGGCACCATTAAGTGC 1699145 Query 75986 TCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAAT 76045 || | ||||| || ||| |||| || | | ||||||| |||||||| ||| Sbjct 1699144 AGCAACTTATGCACAGAGATTGTAGAATATTCTGCCCCTGATGAGATAGCTGTTTGTAAT 1699085 Query 76046 TTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAA 76105 ||||| || || |||||| | || ||||| ||| | || ||||||| | || Sbjct 1699084 TTGGCCTCCATTGCCCTTAATATGTTTGTCACGCCAGAAA---AGACCTTTGATT-TCAA 1699029 Query 76106 AAACTTCATGAA-ATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 ||| || | || | ||||| || ||||||| ||||| ||| | |||| |||| || Sbjct 1699028 AAAATTGAAAAATGTTACAAAAGTTATTACCAAGAATCTCAACAAAATCATCGACATCAA 1698969 Query 76165 TTTTTATCCCGTTG--AGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 |||||| |||||| || || ||||||| ||| |||| || | ||||||||| | Sbjct 1698968 CTTTTAT-CCGTTGCCCGA-AGCTAGAAAGTCCAATTTGCGTCATCGTCCTATTGGTATA 1698911 Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282 |||||||| ||| | || ||| || ||||| || ||| | | ||| || | Sbjct 1698910 GGTGTTCAGGGTTTTGCCGATACTTTGATTTTAATGCGTTACCCCTATGAGAGTGAAAAG 1698851 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 || | | ||| | || || ||||| || ||| | | | |||| || ||| Sbjct 1698850 GCATTTTTGTTAAATCAACAGATTTTCGAAACTATTTATTATGGCGCTTTGGAAGCTAGT 1698791 Query 76343 TGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCG--CGTCCC 76400 ||||||||||| ||| | || | ||||| || | | || | ||| | || Sbjct 1698790 TGTGAATTGGCCGAAAAAGATGGCACATATGAAACTTATCCCGGCTGTCCAGTAAGT--- 1698734 Query 76401 AAGGG-GTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCA-AC---TACGACTG 76455 ||||| | || || | |||||||||| | ||| || | || || | |||| Sbjct 1698733 AAGGGTATACTACAATATGATATGTGGAA----TAAAACACCCACAGACTTGTGGAACTG 1698678 Query 76456 GGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCA 76513 | | | ||||| |||| | | ||| | || | | ||||| | | || Sbjct 1698677 GTCAGAGTTGAAGGAGAAAATCAGTCAACATGGTGTACGCA--ATTCTTTGCTATTAGCC 1698620 Query 76514 CCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATAC 76573 |||||||| ||||| || ||||||||||| | || || ||||||| ||||||||| ||| Sbjct 1698619 CCAATGCCCACAGCTTCGACCGCACAAATTCTAGGCAACAATGAATCCTTTGAACCGTAC 1698560 Query 76574 ACAACAAACATCTAC 76588 || | || || ||| Sbjct 1698559 ACCTCTAATATTTAC 1698545 >seq583 Length=2816 Score = 82.4 bits (90), Expect = 9e-11 Identities = 89/118 (75%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 65100 TGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGG 65159 ||| |||||| |||||||| || |||||| || |||| |||||||||||||| || Sbjct 194 TGTCGAGGGTGTCTTCTTCAGTGGTTCATTCGCTGCCATTTTCTGGTTGAAGAAGCGTGG 253 Query 65160 TCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCGAGATGAGGGTCTCCAC 65217 | ||||| || || ||| ||||| ||||||||| ||||||||||| | ||| Sbjct 254 CTTGATGCCTGGTTTAACATTCAGTAATGAGCTTATTTCCAGAGATGAGGGTATGCAC 311 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596556825953440