Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_020879.1 Length=161978 Score E Sequences producing significant alignments: (Bits) Value seq253 105 7e-18 >seq253 Length=360942 Score = 105 bits (116), Expect = 7e-18 Identities = 252/374 (67%), Gaps = 8/374 (2%) Strand=Plus/Plus Query 36730 ACCGAGATACCCGCAAACTCTTCGGATAACTGA--CATCTTTGACGAATCGTGGTTACCA 36787 ||| ||||| || || ||||| ||||| || || || ||| | || ||||||||| Sbjct 104054 ACCTAGATAACCACACACTCTACGGATCACGGAGACACGGTTGGTG--TCATGGTTACCA 104111 Query 36788 CAGCTTGGACAACTAAATCCTTTCGAGGTGCATTTGAATTCACCGTCAAAACCGCATTCA 36847 || | ||| || ||| ||||| ||| || || ||||||||| ||| || |||||| Sbjct 104112 CAACGTGGGCACACAAAACCTTTACTGGTACAGTTAAATTCACCGGTAAATCCACATTCA 104171 Query 36848 TAGCATTTATCGACAGGTGTGTTTGTTCCAAAATAGGAAAGATTTTCCATCGC-GTAATC 36906 || |||| ||| | ||| ||||| |||||| |||| | | || | ||| || ||| || Sbjct 104172 TAACATTCATCAATAGGCGTGTTGGTTCCATAATAAGGTACATGCT-CATAGCTGTAGTC 104230 Query 36907 CCAAATTTGCTCAAGGGCCTCGAGATTGTTTCGCATATTGGGTAGTTCGACATAGCTGAT 36966 ||||| | ||||| || | | |||| | | || || ||| | |||| || Sbjct 104231 CCAAACGTCTTCAAGTGCTTTCAAGTTGTGCTGTAAGTTTGGATACTCGCCGTAGCAAAT 104290 Query 36967 ATGCCCGCCTGATGCAATCCAATGGAATTCTTTTTCGGCATCTATTTTGTCATACGGGTT 37026 | ||||| ||| | | || || | ||| ||| || || || || ||||| Sbjct 104291 AAAACCGCCATTTGCGAGAGCAGGGTATGGCTGTTCAAAATCAATCTTATCGTATGGGTT 104350 Query 37027 CAACTCG-GCATCAACAGGAATATGGAAGCTATTCGTATACCAATCCTTGTCCGTAATTC 37085 ||| || |||||| || ||||| ||||| || || || | || ||||||| | Sbjct 104351 -AACGCGTTTTTCAACATCAAGGTGGAAACTATTGGTGTAGTAACCTTTTTCCGTAACAC 104409 Query 37086 CTTCGATAACGCCA 37099 |||||||||| ||| Sbjct 104410 CTTCGATAACCCCA 104423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518190504008240