Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_021073.1 Length=107218 Score E Sequences producing significant alignments: (Bits) Value seq253 105 5e-18 >seq253 Length=360942 Score = 105 bits (116), Expect = 5e-18 Identities = 174/251 (69%), Gaps = 0/251 (0%) Strand=Plus/Minus Query 6142 CCACCTAATGTCATTACTGCACACCGAGATGGCGTAATTCATTTCCATGATATGGATGAG 6201 |||| | |||| ||| ||| ||| | || | |||||||| || ||| | ||| | Sbjct 105667 CCACGTGATGTGGTTATTGCTCACGAACGCGGTGAAATTCATTATCACGATCTCGATTAT 105608 Query 6202 TCGCCGTTCTACCCGATGTTCAACTGCTGTTTGGTCGATCTTAAAGGTATGTTGGCGAAT 6261 |||| || | ||| ||||| ||||| || | |||||| |||| ||||| | ||| Sbjct 105607 GCGCCATTTTTCCCCATGTTTAACTGTATGCTGATTGATCTTGAAGGCATGTTAACTAAT 105548 Query 6262 GGGTTTATGATGGGTAACGCAGACATCGAAACCCCTAAGTCAATCTCAACTGCGTGTGCT 6321 ||||||| |||||||| || || || || | ||||| ||||| || ||||| || Sbjct 105547 GGGTTTAAAATGGGTAATGCCGAAATAGAGCCTCCTAAATCAATTTCCACTGCCACCGCA 105488 Query 6322 ATCACTGCACAAATTATCGCTCAGGTTGCGTGCCACCAATACGGTGGGGTTAGCCTCAAT 6381 | || || |||||||||||||| || || |||| || ||||| | | |||| Sbjct 105487 GTGACAGCCCAAATTATCGCTCAAGTAGCTAGCCATATTTATGGTGGCACCACCATCAAC 105428 Query 6382 CGTCTTGATGA 6392 || ||||||| Sbjct 105427 CGCATTGATGA 105417 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 342965639692547