Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_021190.1 Length=46150 Score E Sequences producing significant alignments: (Bits) Value seq1596 109 2e-19 >seq1596 Length=248270 Score = 109 bits (120), Expect = 2e-19 Identities = 131/177 (74%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 42915 ACCCGCGCCGCGCTTTACTCCTTCACCTATAACGTTGGCTCTGGTGCTTTTGCCAGCTCG 42974 ||||| ||||| |||| ||||| | || ||||| ||| | || |||||||| | || Sbjct 102376 ACCCGAGCCGCTATTTATTCCTTTGCTTACAACGTGGGCACAGGAGCTTTTGCACGTTCT 102317 Query 42975 ACGCTGCTGAAGAAGCTGAACTCCGGTGATGTTCCGGGTGCGTGTAAAGAACTGCAGCGC 43034 ||| ||||||||||||| ||| | |||||| | | ||||| || || ||||| | ||| Sbjct 102316 ACGATGCTGAAGAAGCTAAACGCTGGTGATATCGCTGGTGCTTGCAACGAACTTAAACGC 102257 Query 43035 TGGACTTATGC-TGGCGGCAAGCAGTGGAAGGGGCTGATCACCCGGCGCGAGATTGA 43090 ||||| || || || || || ||||||| || ||||| || || | ||||| || Sbjct 102256 TGGACATACGCAGGGGGGTAAAGAGTGGAAAGGCCTGATAACACGCAGAGAGATAGA 102200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 147555398385472