Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_021344.2 Length=176227 Score E Sequences producing significant alignments: (Bits) Value seq253 150 2e-31 >seq253 Length=360942 Score = 150 bits (166), Expect = 2e-31 Identities = 768/1190 (65%), Gaps = 56/1190 (5%) Strand=Plus/Minus Query 152270 CAACGAGAACGCGAACAAAGAT-GCAAGGGTATTCCCGACACAGCGCGATTTGCTGGCGG 152328 ||| || || || |||||||| |||| | || ||| || || || |||||||| || | Sbjct 105764 CAATGAAAATGCAAACAAAGACAGCAAAGTGAT-CCCTACCCAACGTGATTTGCTCGCAG 105706 Query 152329 GTATCGTAGCGAAGCATTTCGCCCGTAATCATATCCTCCCGAAACATATCGTAGAAGCGC 152388 | || || || ||||||| ||| | ||||| | || || | || || | Sbjct 105705 GCATTGTCGCAAAGCATTACGCTAAACAACATATTTTGCCACGTGATGTGGTTATTGCTC 105646 Query 152389 ATGATTCCGGTGACATCCACTATCACGATCTGGACTATA-GCCCGTTCACCCCTTACACT 152447 | || |||||| || || ||||||||||| || ||| ||| || |||| | | Sbjct 105645 ACGAACGCGGTGAAATTCATTATCACGATCTCGATTATGCGCCATTTTTCCCCATGTT-T 105587 Query 152448 AACTGCTGTCTGGTTGACCTGAAAGGTATGCTGGAGAACGGTTTTAAAATGGGTAACGCG 152507 ||||| ||| |||| || |||| ||| | || || |||||||||||||| || Sbjct 105586 AACTGTATGCTGATTGATCTTGAAGGCATGTTAACTAATGGGTTTAAAATGGGTAATGCC 105527 Query 152508 GACATTGAACCGCCTAAATCGATCGGTGTTGCTACCGCTCTCATGGCGCAGATCACCGCA 152567 || || || || |||||||| || ||| ||||| | | || || || | ||| Sbjct 105526 GAAATAGAGCCTCCTAAATCAATTTCCACTGCCACCGCAGTGACAGCCCAAATTATCGCT 105467 Query 152568 CAGATTGCCTCTCACCAGTACGGCGGGACAACCTTTGCGAACG--TGGATAAAGTGCTGG 152625 || | || || || || || || ||| | | | || | ||| || | || | Sbjct 105466 CAAGTAGCTAGCCATATTTATGGTGGCACCACCAT--CAACCGCATTGATGAAATCCTTG 105409 Query 152626 CTCCATACGTCGAAATGACATTCTTCAAACATCTGCACGATGCTGAACA-TTACGGTATC 152684 |||| || ||| | || | | |||||||| | || || || || || || Sbjct 105408 CTCCTTATGTCCACATCAGCTATGAAAAACATCTAAAAACAGC-GATCAATTGGGGCATT 105350 Query 152685 GAACACTATAATGATTATGTGTATGC-GATTGAAAAGACTGAAAAAGA-TGTGTATGATG 152742 ||| | || | | ||||| ||| | || || |||||||| ||| || |||| Sbjct 105349 GAAGA------TGCGAAAGGCTATGCTGATAGCCAA-ACCGAAAAAGAATGT-TACGATG 105298 Query 152743 CGTTCCAGTCCTATGAGTATGAAGTAAACACCCTACATACTGCCAACGGACAAACCCCGT 152802 | ||||| ||| ||| || ||||| ||||| || ||||| ||||| || |||||||| | Sbjct 105297 CCTTCCAATCCCTTGAATACGAAGTGAACACACTGCATACCGCCAATGGTCAAACCCCCT 105238 Query 152803 TTGTTACCATCACTTTCGGTACTGGTACGAGCG-ATTATGAACGCATGATCCAGAAAGCG 152861 | || ||| | || ||| || || | || | | | |||| ||||||| || | Sbjct 105237 TCGTAACCTTTGGGTTTGGTTTAGGCAC-ATCGCAAGAAGCACGCTTGATCCAACAATCC 105179 Query 152862 ATCCTGAAAAACCGTATTCGCGGCCTT-GGTAAAGAGGGTATTACTCCGGTATTCCCGAA 152920 || || ||||||||||| ||| | || |||||| | ||| ||| | || ||||| || Sbjct 105178 ATTCTAAAAAACCGTAT-CGCTGGGTTAGGTAAAAATCGTAAAACTGCCGTTTTCCCTAA 105120 Query 152921 ACTGGT-TATGTTCATGGAAAAAGGAATTAACCTTGATCCAGAGGATCAAAACTATGACA 152979 | | || | || | || ||||||| |||| | | | |||| |||||||| | Sbjct 105119 ATTAGTGTTTGCT-ATTAAAAAAGGCCTTAATCACCAATATGGTGATCCTAACTATGATA 105061 Query 152980 TCAAACAACTTGCCCTGGAATGTGCTTCGAAACGCATGTACCCAGATATCATTAGCGCAT 153039 ||||||| | || | || ||||| ||||||||||| || || ||| ||| || Sbjct 105060 TCAAACAGTTAGCATTAGAGTGTGCGAGCAAACGCATGTATCCCGACATC-TTAAACTAT 105002 Query 153040 CTAATAACCGCCG-TATCACTGGTTCTAGCGTTCCTGTATCTCCTATGGGTTGTCGCAGT 153098 | | | || | | || || | |||| | | | || ||||| || ||||| Sbjct 105001 GACAAAGTTGTCGATGTAACGGGCT----CGTT--TAAAACGCCAATGGGCTGCCGCAGC 104948 Query 153099 TTCCTTAGCGTGTGGCATGATGATAACGGTAATGAAATTCTGGATGGACGTAATAACCTT 153158 || ||||| |||| | || || || || | |||||| ||||| |||||||| | Sbjct 104947 TT-CTTAG-GTGT-CTACGAAGAAAATGGCCAACAAATTCATGATGGCCGTAATAATTTA 104891 Query 153159 GGTGTGGTGACAATCAACCTCCCGCGCATTGCGATCGAAGCTGAAGCACAGGAAGATGAA 153218 ||||| | | | ||||| ||||| ||||| || ||||| ||| ||| | ||||| Sbjct 104890 GGTGTCATTAGCCTTAACCTGCCGCGTATTGCCATTGAAGC----GCA-AGGCA-ATGAA 104837 Query 153219 GACGCACACGACGCATTCTGGCGCATCCTTGATGAACGTCTGGATCTGTGCTTTGAAGCC 153278 ||||| || |||| || || ||||| || | | | ||||| Sbjct 104836 ---------GACGCGTTTTGGCAACGACTCGAAGAACGCCTAGCGATCGCCAAAAAAGCC 104786 Query 153279 CTGATGACTCGTATCGAAAGCCTACGCGGTGTTAAAGCCAGTGTTGCGCCGATCCTGTAC 153338 ||||||| || || | | ||||| ||| ||||| | ||||| || ||||| || Sbjct 104785 TTGATGACACGCATTGCACGCCTAGAAAATGTCAAAGCACGCGTTGCACCTATCCTATAT 104726 Query 153339 ACAGAAGGTGCTTTTGGTGTCCGACTGAAACCGGATGATGAAATTCTGGAACTGTTCAAA 153398 | ||||| || | || || ||||| ||| | |||||| | ||| | || ||| Sbjct 104725 ATGGAAGGCGCCTGCGGAGTACGACTCAAAGCAGATGATAGTGTGGCGGAGATCTTTAAA 104666 Query 153399 AATGG--GCGTAGCTCTATCAGCCTTGGTTATATCGGACTACATGAAACA 153446 || || ||| | | ||||| | || ||||| || ||||||| ||| Sbjct 104665 AACGGTCGCGCATCCATATCA--TTAGGCTATATTGGCTTACATGAGACA 104618 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563786327666760