Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq229 134 2e-26 >seq229 Length=456533 Score = 134 bits (148), Expect = 2e-26 Identities = 311/461 (67%), Gaps = 6/461 (1%) Strand=Plus/Minus Query 87552 ATCTTCGCCACCGGCGAAGCGGGGTGTGGGAAAACGTTTATTTCCGCCGCATACGCTTGC 87611 || ||||| | || ||||| || || || |||||||||||| ||||| ||| || Sbjct 314270 ATTTTCGCAAATGGGGAAGCCGGTTGCGGTAAAACGTTTATTAGTACCGCACTTGCT-GC 314212 Query 87612 GAACGT-TTGCTGGCCAAAGATATCGAACGTATCATCGTCACTCGTCCGGTGCTCTCCGC 87670 | | | || | ||||| ||| | ||||| ||||| || || || | || Sbjct 314211 GGATGCATTAATCAATAAAGACATCAATAAAATCATTGTCACACGACCTGTCTTGCAGGC 314152 Query 87671 AGATGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCGTACTTCCG 87730 ||| |||||| | || || || || ||||| | || ||||| || || || || || || Sbjct 314151 AGAAGAAGATCTCGGTTTTCTTCCGGGCGATATGGCTGAAAAGTTTGCGCCATATTTTCG 314092 Query 87731 CCCTGTTTATGACGTTCTTCAAAAACGTCTCGGTAGCCGCTACCTGCAATACTGCCTTAA 87790 || ||||||||||| | ||| | | |||| || | |||||||| | Sbjct 314091 GCCGGTTTATGACGTATTAGTGAAAAGATTAGGTAATTCCTTTTTACAATACTGTTTGCG 314032 Query 87791 GCCCGGTATCGACAAAGTGGAGATTGCTCCTTTTGCGTACATGCGTGGCCGCAGTTTCGA 87850 ||| | || | || || || ||||| || ||||| || |||||||| || | || || Sbjct 314031 GCCTGAGATTGCTAAGGTTGAAATTGCACCATTTGCCTATATGCGTGGTCGTACATTTGA 313972 Query 87851 AAATGCGGTTGTCATTTTAGATGAAGCTCAGAACACTACTGCTCA-GCAGATGAAGCTCT 87909 ||||||| |||| || ||||||||||| || || |||| ||| || ||||| | | Sbjct 313971 AAATGCGATTGTGATATTAGATGAAGCGCAAAATGTGACTG-TCACACAAATGAAAATGT 313913 Query 87910 TCCTGACACGTATCGGGGAGAACTGT-ATCGTTATCGTAAACGGTGACGTCACACAGTGC 87968 || | || ||| | || ||||| ||| | || || || || ||||| || || ||||| Sbjct 313912 TCTTAACGCGTTTAGGAGAGAA-TGTCACAGTGATTGTTAATGGTGATGTAACGCAGTGT 313854 Query 87969 GACTTGCCCAAAGGGGTGAAGTCTGGACTGGCCGACGCGTT 88009 || | || |||| || | |||||| | ||||| || || Sbjct 313853 GATCTACCAGAAGGTGTTACATCTGGATTAGCCGATGCCTT 313813 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716621455014520