Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq284 91.5 2e-12 >seq284 Length=621799 Score = 91.5 bits (100), Expect = 2e-12 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 1592108 AAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCACC 1592167 || |||||||| || || || ||||||| || || | ||||| ||| || Sbjct 153380 AAACGCACCGATGATATTTCATCGTGGGATGCCGATTTCCTAAAGGTCGATCAGGGTACG 153439 Query 1592168 CTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGG 1592227 || || || ||||| | ||||||||||| | ||||||||| ||| | ||| || Sbjct 153440 CTATTCGAATTGATTTTAGCCGCCAACTATTTGGACATCAAGGGACTGTTGGATGTTACA 153499 Query 1592228 TGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTT 1592287 || || |||||||||| ||||| ||||| || | || || ||||| |||||||| ||| Sbjct 153500 TGTAAAACTGTGGCCAATATGATTAAGGGTAAAACTCCAGAAGAGATTCGCAAGACGTTT 153559 Query 1592288 AACATCAA 1592295 || || || Sbjct 153560 AATATTAA 153567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106998623198021