Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq964 87.8 1e-12 seq1304 84.2 1e-11 >seq964 Length=291957 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 |||||||| ||||| || ||||| ||| |||| |||| |||| ||| || ||||| ||| Sbjct 216845 TCCTTCTGGATGTTGTAATCCGAAAGGGTGCGTCCATCTTCCAATTGTTTACCGGCAAAG 216786 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| |||||| | || | || ||||| || | || || |||||| | Sbjct 216785 ATCAAACGTTGTTGGTCTGGGGGAATACCTTCCTTATCTTGGATCTTAGCCTTGACGTTT 216726 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | || || || | || ||||| ||||| || | || || || Sbjct 216725 TCAATGGTATCGGAAGGTTCAACTTCCAAAGTGATGGTTTTTCCGGTCAAAGTTTTCACG 216666 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 216665 AAGATCTGCAT 216655 Score = 86.0 bits (94), Expect = 4e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 || |||| || | |||| |||||| || ||||| ||||| || | | | || |||| Sbjct 217094 AGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAGACAAGGTACGACCATCT 217035 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 |||||||| || ||||||||||||| |||||||| ||| | || | || ||||| || Sbjct 217034 TCCAGTTGTTTACCGGCGAAGATCAAACGTTGCTGATCTGGGGGAATACCTTCCTTATCC 216975 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | ||||| || ||| | || | || | ||||| || | || ||||| Sbjct 216974 TGGATTTTAGCCTTTACGTTCTCAATGGTATCGGAAGGTTCGACTTCCAAAGTGATGGTT 216915 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | ||| || || ||||| ||||| Sbjct 216914 TTGCCGGTCAAGGTTTTAACGAAGATTTGCAT 216883 >seq1304 Length=336898 Score = 84.2 bits (92), Expect = 1e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||| || ||||| ||||| || | | |||| |||| |||| ||| || || |||||| Sbjct 274209 TCCTTTTGGATGTTGTAGTCGGACAAGGTGCGACCATCTTCCAATTGTTTACCAGCGAAG 274268 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 |||| ||||| || ||| | || | || || ||||| | ||||| ||||| | Sbjct 274269 ATCAAACGTTGTTGATCTGGGGGGATACCTTCTTTGTCTTGGATTTTGGCCTTGACATTT 274328 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | || | ||| || || | ||| |||||||| || || | || || || Sbjct 274329 TCAATGGTGTCGGAAGGCTCAACTTCCAAGGTAATGGTCTTACCAGTTAAAGTTTTGACG 274388 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 274389 AAGATCTGCAT 274399 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325686000450347