Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq165 118 3e-22 >seq165 Length=448888 Score = 118 bits (130), Expect = 3e-22 Identities = 205/298 (69%), Gaps = 0/298 (0%) Strand=Plus/Plus Query 37211 TGGGCATCATCCCTGGCTCGATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATT 37270 |||| ||||| || ||||| ||||| || || ||||||||||| || |||||| Sbjct 93823 TGGGGATCATTCCAGGCTCAATGGGGGCCAAAAGTTTCATCGTTCGTGGTCTAGGAAATG 93882 Query 37271 CCGAATCGTTCTGCTCTTGCAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAA 37330 ||| |||||||| || ||||| ||||| || || ||||||| || | ||||| | Sbjct 93883 AAGAAAGCTTCTGCTCATGTAGCCATGGTGCAGGCCGTGTGATGAGTCGTACTGAAGCCA 93942 Query 37331 AACGCCGGTTCACAGTCGAGGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAG 37390 || || | |||| || || | ||||| | | |||||||| |||| Sbjct 93943 AAAAACGTTATTCAGTATCCGACCAGAAAATAGCCACTGCCCATGTTGAGTGCCGAAAAG 94002 Query 37391 ATGCCGAAGTGATCGACGAGACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCG 37450 || || ||||| || || | ||| ||| || || || || ||||| || ||||||| Sbjct 94003 ATAGTGATGTGATTGATGAAATTCCAATGGCCTATAAAGATATTGATGCCGTAATGGCCG 94062 Query 37451 CGCAATCCGCCCTGGTGGACATCGTGCACACGCTGCGCCAAGTCGTTTGCGTGAAGGG 37508 ||||||| | |||| || || || || ||||| |||||||| || || || || || Sbjct 94063 CGCAATCATCATTGGTAGAAATTGTACATACGCTACGCCAAGTGGTGTGTGTAAAAGG 94120 Score = 80.6 bits (88), Expect = 7e-11 Identities = 124/176 (70%), Gaps = 6/176 (3%) Strand=Plus/Plus Query 23547 CAGATACTCGCCGGCAATCTCGGCGACCTTGCCGAAGAACACGACGCGGTGCCATTCGGT 23606 |||||| ||||| |||| || || | || ||||| | ||| || |||||||||||||| Sbjct 55577 CAGATATTCGCCCGCAACTTCAGCTAATTTTCCGAAAATCACTACACGGTGCCATTCGGT 55636 Query 23607 CTTTTCCTTGCGC---TCGCCGGTCTGCTTGTCCTTCCAGGTTTCCGACGTGGCCAGGCT 23663 ||||| ||| || ||||| ||||| || |||| |||| || || ||||| | Sbjct 55637 TTTTTC---ACGCATTTCACCGGTTTGCTTATCGCGCCAGCTTTCAGAAGTTGCCAGAGT 55693 Query 23664 GATGTTGCAGACGGCATCGCCGTTTTGCAGGTAGCGCACTTCCGGGTCATTACCCA 23719 | ||| || ||| ||||||| ||| ||| || | ||| || || | |||| Sbjct 55694 TAGGTTTGCCACAGCACCGCCGTTAGGCATGTAACGGATTTCAGGATCTTGCCCCA 55749 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139280366718556