Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_023575.1 Length=45550 Score E Sequences producing significant alignments: (Bits) Value seq165 86.0 2e-12 >seq165 Length=448888 Score = 86.0 bits (94), Expect = 2e-12 Identities = 198/295 (67%), Gaps = 4/295 (1%) Strand=Plus/Plus Query 30098 TCTGTTGTGTAGCGGTCCTGACCGTCCTGCGCCTGCCACTTTCGAGTTCTGAGTGAACCC 30157 ||||| ||||| || || ||||| || | |||||||| || ||| | ||||| Sbjct 55491 TCTGTGGTGTAACGATCTTGACCACTTTGATCTTGCCACTTACGTGTTTGCAAAGAACCT 55550 Query 30158 TCGACGTACAGTTGCTGACCCTTCTTTACGTGCT--GCCCGACGATCTCCGCCAACTTCC 30215 || | ||| | ||| ||| |||| ||| | | ||||| | | || || || || | Sbjct 55551 TCAATGTAAACTTG-TGAGCCTTTTTTCAGATATTCGCCCG-CAACTTCAGCTAATTTTC 55608 Query 30216 CGAAGAACACCACGCGGTGCCATTCGGTGCGCTCCTGTTGCTGGCCGGTCTGCTTGTCCT 30275 |||| | ||| || |||||||||||||| || | | ||||| ||||| || Sbjct 55609 CGAAAATCACTACACGGTGCCATTCGGTTTTTTCACGCATTTCACCGGTTTGCTTATCGC 55668 Query 30276 TCCAGCTCTCGCTGGTGGCGAGGGTGATGTTGGTCACCGCATTGCCGTTGGGCATATAGC 30335 |||||| || || || || || | ||| | ||| ||| |||||| ||||| || | Sbjct 55669 GCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGCATGTAAC 55728 Query 30336 GAGTTTCCGGGTCACCACCGACGTTGCCAACCAGAATGACTTTGTTAACGCCTCT 30390 | |||| || || || | ||| || | ||||| ||||| || |||||||| Sbjct 55729 GGATTTCAGGATCTTGCCCCAAGTTACCGATAAGAATTACTTTATTTACGCCTCT 55783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 145635437441872