Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq229 174 2e-38 >seq229 Length=456533 Score = 174 bits (192), Expect = 2e-38 Identities = 326/479 (68%), Gaps = 0/479 (0%) Strand=Plus/Plus Query 87397 CTGAAACGCTGTAGCGCGTCGGAAAGTCCACTTTGGACCCCTCTCGGTAAATCACACTGA 87456 || |||||||||| || |||| | |||| | || ||| |||| ||||||||| Sbjct 313801 CTAAAACGCTGTAAGGCATCGGCTAATCCAGATGTAACACCTTCTGGTAGATCACACTGC 313860 Query 87457 GCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGTGTCAGGAACATTTTC 87516 | || || || ||||||||||| || || ||||| || | ||| || | |||||||||| Sbjct 313861 GTTACATCACCATTAACAATCACTGTGACATTCTCTCCTAAACGCGTTAAGAACATTTTC 313920 Query 87517 ATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACCGCGTTCTCAAACGTG 87576 || |||| || || || || ||||| || | || || | ||| || ||||| || Sbjct 313921 ATTTGTGTGACAGTCACATTTTGCGCTTCATCTAATATCACAATCGCATTTTCAAATGTA 313980 Query 87577 CGGCCACGCATATACGCGAAGGGAGCAATTTCCACCTTCTTCACATCCGGGCGCAAGCAG 87636 || ||||||||||| || || || |||||||| ||||| | || || ||||| ||| Sbjct 313981 CGACCACGCATATAGGCAAATGGTGCAATTTCAACCTTAGCAATCTCAGGCCGCAAACAG 314040 Query 87637 TACTGAAGGAACGTACCACCAAGGCGTTTCTCCAGGATGTCTTGAACCGGGCGGAAATAC 87696 || || | || | | ||| | | |||| | | | ||| | |||||| || ||||| Sbjct 314041 TATTGTAAAAAGGAATTACCTAATCTTTTCACTAATACGTCATAAACCGGCCGAAAATAT 314100 Query 87697 GGGGCGAATTTCTCGCTGATGTCCCCAGGCAAGAAGCCCAGGTTCTCACCGGACTCTAAG 87756 || || || || || || || || || | || || || | || | | || ||| Sbjct 314101 GGCGCAAACTTTTCAGCCATATCGCCCGGAAGAAAACCGAGATCTTCTTCTGCCTGCAAG 314160 Query 87757 ACAGGACGCGTCACGATGATGCGCTCCACCTCTTTATCCAGCAATGCTTTGGCCGCGTGC 87816 ||||| || || || ||||| | | ||||||| | ||||| | || || | Sbjct 314161 ACAGGTCGTGTGACAATGATTTTATTGATGTCTTTATTGATTAATGCATCCGCAGCAAGT 314220 Query 87817 GCAGTTGACAGGAATGTTTTACCACAACCGGCTTCACCCGTTGCAAAGATTAATTGCTT 87875 || || | || |||||||| ||||||||||| || |||| || |||||||| || Sbjct 314221 GCGGTACTAATAAACGTTTTACCGCAACCGGCTTCCCCATTTGCGAAAATTAATTGTTT 314279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698541842152520