Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_024140.1 Length=72028 Score E Sequences producing significant alignments: (Bits) Value seq410 91.5 7e-14 >seq410 Length=72445 Score = 91.5 bits (100), Expect = 7e-14 Identities = 222/335 (66%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 68091 ACGAAGTCGTAGGTGAATCGGTCAGCCCATGCACCCTTGAACTCTTCCCGTGAGCACGGG 68150 || || || || | |||||| |||| ||||||||| || || | | || ||| Sbjct 22399 ACAAATTCATACGAGAATCGCTCAGGCCATGCACCAACAAATTCATGTTCTTCACAAGGG 22340 Query 68151 AATCTCTCGCACACAGGGTAGACGTTGACCTTCCAGGCACCAGACTCCACTGCTTTGTAC 68210 || | ||| || | |||||| ||||| || | ||| | || ||||| || || | || Sbjct 22339 AAGCGCTCACAGATAGGGTAAACGTTAACGTACCAACCGCCTGACTCAACGGCCTCATAT 22280 Query 68211 AGTGGATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGC 68270 || ||| ||| || || || ||||| ||| ||| | ||||| | |||| Sbjct 22279 AGAACATCATTCTTATTAAAAGGCGTACCATTAAAGACAATCTTTTTCTTTGTTGGGTCA 22220 Query 68271 AGTGCGTAGTCCACTGCCTTGTACACCGTGTCTTCGATGGCTGCGATGACGGTTGGTGAG 68330 || || | ||| || | || ||||| ||||| | || ||| | || | ||| || Sbjct 22219 AGGGCATGGTCAACACCGTTATACACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGAC 22160 Query 68331 CGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGCTTACC---C 68387 |||||| ||||| || |||||||| ||||| || || ||||||||||| | Sbjct 22159 TTAGCATCCTCGTCACTCACTAAGTCATCAAGTACAGCCAGGGTAGGACGCTTACCATAC 22100 Query 68388 ATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 68422 || | || |||||||| ||| ||||| ||||| Sbjct 22099 ATTTTATT---ACCACGGATACCTGTCTTAGCACC 22068 Score = 82.4 bits (90), Expect = 4e-11 Identities = 144/206 (70%), Gaps = 4/206 (2%) Strand=Plus/Minus Query 61611 ACCAACACGGTTCACGCGACCGCCGATCTCGGTGAGGGTCGGCATCTTCGCGGTGATGTT 61670 |||||||||||| || ||||| || || | | |||||| || | ||| || Sbjct 34470 ACCAACACGGTTAACACGACCACCTTCTTCACCCATGTACGGCATTTTATCAAGGATTTT 34411 Query 61671 GCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGGAAGCGTC 61730 || ||||| |||||||| | ||| || | ||| || |||| ||||| || Sbjct 34410 ACCAACGTCTTTAGAAGAACCGTATAAGTTACCATCTTTGATTTTAACGCCAGAAGCATC 34351 Query 61731 GATACCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTGCAGT-CGC-ACG 61788 |||||| |||||||||||||| ||||| || |||| || |||||||| || || ||| Sbjct 34350 GATACCTTGGTCGTTCACGTTACGGTCATCCAGCAATGGAATGTAGTG--GTAAGCAACG 34293 Query 61789 ATCTCTTTGCCGTAGTGCTTCGGCAT 61814 || ||||| || ||||| ||||| Sbjct 34292 ATTTCTTTACCCATATGCTTAGGCAT 34267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230359990630877