Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_024369.2 Length=41569 Score E Sequences producing significant alignments: (Bits) Value seq165 149 2e-31 >seq165 Length=448888 Score = 149 bits (164), Expect = 2e-31 Identities = 211/297 (71%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 38193 AATGGCAAGCAGAGGTGTAAACAAGGTGATCTTAATTGGTCACCTTGGTCAAGATCCAGA 38252 |||||| |||||||| ||||| || || || | || ||| || | || |||||||| || Sbjct 55793 AATGGCCAGCAGAGGCGTAAATAAAGTAATTCTTATCGGTAACTTGGGGCAAGATCCTGA 55734 Query 38253 GGTGCGCTATCTACCAAGCGGCGGCGCAGTGGCAAACATCACAATAGCAACGTCTGAGGT 38312 | || || | || | |||||| || ||||||||| | || | ||||| ||||| Sbjct 55733 AATCCGTTACATGCCTAACGGCGGTGCTGTGGCAAACCTAACTCTGGCAACTTCTGAAAG 55674 Query 38313 TTGGCGGGATAAGCAAACCGGACAGCCAAAAGAGAAAACAGAGTGGCACCGAGTTACTTT 38372 ||||| |||||||||||||| | || ||||| || |||||||| || | Sbjct 55673 CTGGCGCGATAAGCAAACCGGTGAAATGCGTGAAAAAACCGAATGGCACCGTGTAGTGAT 55614 Query 38373 GTTTGGGAAGCTGGCTGAAGTTGCTGGCGAATACCTTCGAAAAGGATCTCATGTTTATAT 38432 || || || | ||||||||||| |||||||| || |||||| || || ||||| || Sbjct 55613 TTTCGGAAAATTAGCTGAAGTTGCGGGCGAATATCTGAAAAAAGGCTCACAAGTTTACAT 55554 Query 38433 TGAAGGCCAGCTTGAAACTAAGAAGTGGCGGGATCAAAGCGGTCAGGACCGATACAC 38489 |||||| | |||| ||||||| |||||||| ||||| || || ||||| Sbjct 55553 TGAAGGTTCTTTGCAAACACGTAAGTGGCAAGATCAAAGTGGTCAAGATCGTTACAC 55497 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132896496581086