Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_024794.1 Length=167318 Score E Sequences producing significant alignments: (Bits) Value seq253 109 6e-19 seq1596 91.5 2e-13 >seq253 Length=360942 Score = 109 bits (120), Expect = 6e-19 Identities = 357/546 (65%), Gaps = 14/546 (3%) Strand=Plus/Plus Query 45558 ATGTCAGGATACATTCTTTTGCTTGCACATTCTAATGCAAGTTGTTTAATATCATAGTTC 45617 ||||| |||||||| | |||||| ||||| |||||||| | ||||| ||||||||||| Sbjct 105012 ATGTCGGGATACATGCGTTTGCTCGCACACTCTAATGCTAACTGTTTGATATCATAGTTA 105071 Query 45618 GGATCATCTTTATAAAGATTAACACCTTCTTCAA---CAAACATAACAAGTTTAGGAAAA 45674 |||||| | | | |||||| |||| || || ||||| || | |||||| ||| Sbjct 105072 GGATCACCATATTGGTGATTAAGGCCTTTTTTAATAGCAAAC---ACTAATTTAGGGAAA 105128 Query 45675 ATAGGAGTTATTCCATCACGACCAAGACCTTTAATGCGGTTTTTAAGAATTGCCTTCTGA 45734 | | |||| | | || ||| | || || |||||||| ||||| | | || Sbjct 105129 ACGGCAGTTTTACGATTTTTACCTAACCCAGCGATACGGTTTTTTAGAATGGATTGTTGG 105188 Query 45735 ATCATTCGTTCAGTCCAGTCA-GTTCCTGTACCAAATGTAATTGTCACAAAAGGCGTTTG 45793 |||| ||| | || | | || ||| |||||| || || || || || ||||| Sbjct 105189 ATCAAGCGTGC-TTCTTGCGATGTGCCTAAACCAAACCCAAAGGTTACGAAGGGGGTTTG 105247 Query 45794 TCCGTTTGAACTAAAGAGAGTATTTACTTCATACTCATAAGCTTGAAATGCGTCATAGAC 45853 || || | || || || || ||||| || ||| | ||| || || || || || Sbjct 105248 ACCATTGGCGGTATGCAGTGTGTTCACTTCGTATTCAAGGGATTGGAAGGCATCGTA-AC 105306 Query 45854 A-TCTTTTTCTGTTTTGGATTGAGCATAATTCAACGCATCAGCGATTTGCCATTTTTCTG 45912 | |||||||| |||| | | |||||| |||||| | || ||| || | Sbjct 105307 ATTCTTTTTCGGTTTGGCTATCAGCATAGCCTTTCGCATCTTCAATGCCCCAATTGATCG 105366 Query 45913 CATCCTCAATATGTTTTGCATAGGTGCGTTTAACATAAGGAGAAAGAACTTTATCGACAT 45972 | | | ||||||| ||||| || | |||||||||| ||| | || ||| || Sbjct 105367 CTGTTTTTAGATGTTTTTCATAGCTGATGTGGACATAAGGAGCAAGGATTTCATC--AAT 105424 Query 45973 TCG--CAAATGTAGTTCCGCCATACTGGTGAGAAGCAACTTGTGCAGTAATTTGTGCCAT 46030 || | || || || ||||| || ||| ||||| || ||||||| || | Sbjct 105425 GCGGTTGATGGTGGTGCCACCATAAATATGGCTAGCTACTTGAGCGATAATTTGGGCTGT 105484 Query 46031 AATTGCAGTAGCAACACCAATCGATTTAGGCGTTTCAATTTGAGCATTGCCTAATTTAAA 46090 | ||| || ||| ||| |||||||| | || |||| ||||| || | |||||| Sbjct 105485 CACTGCGGTGGCAGTGGAAATTGATTTAGGAGGCTCTATTTCGGCATTACCCATTTTAAA 105544 Query 46091 TCCATT 46096 ||||| Sbjct 105545 CCCATT 105550 >seq1596 Length=248270 Score = 91.5 bits (100), Expect = 2e-13 Identities = 77/95 (81%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 61291 GTAAAGGTACGAGCGATAACGTCGCGCTGTTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 61350 || || ||||||| |||||||| |||| ||||| ||||||||||||||| || || Sbjct 48922 GTGAAAGTACGAGTAATAACGTCTTGCTGCTGTTCTTTAGTCAGAGAGTTAAAACGCACC 48863 Query 61351 GCATATCCGGATACACGGATGGTCAGCTGCGGATA 61385 ||||| || ||||||||||| ||||| || ||||| Sbjct 48862 GCATAACCCGATACACGGATAGTCAGTTGTGGATA 48828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 535278138111440