Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_025430.1 Length=42351 Score E Sequences producing significant alignments: (Bits) Value seq165 105 2e-18 >seq165 Length=448888 Score = 105 bits (116), Expect = 2e-18 Identities = 190/278 (68%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 230 ACCACGATTTCAGTTGTGTAGCGATCAACGCCAGCCTGGTCCTGCCACTTGCGCGTTTGC 289 || || | ||| || ||||| ||||| ||| || || |||||||| || |||||| Sbjct 55482 ACAACCACTTCTGTGGTGTAACGATCTTGACCACTTTGATCTTGCCACTTACGTGTTTGC 55541 Query 290 AGCGCGCCTTCAATGAACACCTTGCTGCCTTTGCGCAGGTACTGGCTGGCGATTTCTGCC 349 | | ||||||||| | || | |||||| ||| || | || || | ||| || Sbjct 55542 AAAGAACCTTCAATGTAAACTTGTGAGCCTTTTTTCAGATATTCGCCCGCAACTTCAGCT 55601 Query 350 AGCTTTCCGAAGATGACCACGCGGTGCCATTCCGTTTTTTCTTTCTTCTCCCCTGTCTGC 409 | |||||||| || || || ||||||||||| |||||||| | | || || || ||| Sbjct 55602 AATTTTCCGAAAATCACTACACGGTGCCATTCGGTTTTTTCACGCATTTCACCGGTTTGC 55661 Query 410 TTATCCTTCCAGGTTTCAGACGTGGCAATTGATAACTGCGCCACGCCGTTGCCGTTCGGC 469 ||||| |||| ||||||| || || | | || | ||||| | |||||| ||| Sbjct 55662 TTATCGCGCCAGCTTTCAGAAGTTGCCAGAGTTAGGTTTGCCACAGCACCGCCGTTAGGC 55721 Query 470 AGCGTGCGGAATTCTGGATCGTTGCCTAAGTTGCCAAT 507 | |||| ||| ||||| | || ||||| || || Sbjct 55722 ATGTAACGGATTTCAGGATCTTGCCCCAAGTTACCGAT 55759 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135398845677578