Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_025437.1 Length=169062 Score E Sequences producing significant alignments: (Bits) Value seq1596 95.1 1e-14 seq253 86.0 7e-12 >seq1596 Length=248270 Score = 95.1 bits (104), Expect = 1e-14 Identities = 78/95 (82%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 62342 GTAAAGGTACGAGCGATAACGTCACGCTGCTGTTCCGGAGTCAGAGAGTTAAAGCGAACT 62401 || || ||||||| |||||||| |||||||||| ||||||||||||||| || || Sbjct 48922 GTGAAAGTACGAGTAATAACGTCTTGCTGCTGTTCTTTAGTCAGAGAGTTAAAACGCACC 48863 Query 62402 GCATAACCGGATACACGGATGGTCAACTGCGGATA 62436 |||||||| ||||||||||| |||| || ||||| Sbjct 48862 GCATAACCCGATACACGGATAGTCAGTTGTGGATA 48828 >seq253 Length=360942 Score = 86.0 bits (94), Expect = 7e-12 Identities = 212/316 (67%), Gaps = 12/316 (4%) Strand=Plus/Plus Query 46582 ATGTCAGGATACATTCTTTTGCTTGCACATTCTAACGCAAGTTGTTTAATATCATAGTTC 46641 ||||| |||||||| | |||||| ||||| ||||| || | ||||| ||||||||||| Sbjct 105012 ATGTCGGGATACATGCGTTTGCTCGCACACTCTAATGCTAACTGTTTGATATCATAGTTA 105071 Query 46642 GGATCATCTTTATAAAGATTAACACCTTCTTTAA---CAAACATAACAAGTTTAGGAAAA 46698 |||||| | | | |||||| |||| ||||| ||||| || | |||||| ||| Sbjct 105072 GGATCACCATATTGGTGATTAAGGCCTTTTTTAATAGCAAAC---ACTAATTTAGGGAAA 105128 Query 46699 ATAGGAGTTATTCCATCACGACCAAGACCTTTAATCCGATTTTTCAGAATTGCTTTCTGA 46758 | | |||| | | || ||| | || || || ||||| ||||| | || || Sbjct 105129 ACGGCAGTTTTACGATTTTTACCTAACCCAGCGATACGGTTTTTTAGAATGGATTGTTGG 105188 Query 46759 ATCATTCGT--TCGGTCCAATCAGTTCCAGTACCAAATGTAATTGTTACAAAAGGCGTTT 46816 |||| ||| | | | || || || |||||| || ||||| || || |||| Sbjct 105189 ATCAAGCGTGCTTCTTGCGAT--GTGCCTAAACCAAACCCAAAGGTTACGAAGGGGGTTT 105246 Query 46817 GCCCGTTTGAACTAAAAAGAGTATTTACCTCATACTCATAAGCTTGAAATGCGTCATATA 46876 | || || | || || || || || || || ||| | ||| || || || || | Sbjct 105247 GACCATTGGCGGTATGCAGTGTGTTCACTTCGTATTCAAGGGATTGGAAGGCATCGTA-A 105305 Query 46877 CA-TCTTTTTCTGTTT 46891 || |||||||| |||| Sbjct 105306 CATTCTTTTTCGGTTT 105321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540858818612560