Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_025462.1 Length=99730 Score E Sequences producing significant alignments: (Bits) Value seq1303 98.7 6e-16 >seq1303 Length=344040 Score = 98.7 bits (108), Expect = 6e-16 Identities = 127/175 (73%), Gaps = 8/175 (5%) Strand=Plus/Minus Query 19958 ATTGTATCAGGTTGGAATCCTCATGATGTTGCAGATGTAGATTTACCACCTTGCCATACA 20017 ||| | |||| |||||||||| ||| | || | | | ||| || || || ||| Sbjct 96114 ATTATGTCAGCCTGGAATCCTCTCGATATACCACAAATGGCTTTGCCGCCCTGTCAT--- 96058 Query 20018 CTATTT----CAATTCTTTGTGAAAGATGGTAAATTATCTTGCCAGTTGTATCAACGAAG 20073 | ||| ||||||| |||| | ||||| || |||| ||||||||||| ||||| || Sbjct 96057 -TGTTTGGCACAATTCTATGTGGCAAATGGTGAACTATCATGCCAGTTGTACCAACGCAG 95999 Query 20074 TGCTGACTTATTACTTGGTGTTCCATTTAATATTGCATCTTATGCTTTACTTACA 20128 |||||| | || ||||| ||||||||||| || || ||||||||||| ||| Sbjct 95998 CGCTGACATGGGTCTGGGTGTACCATTTAATATAGCTTCATATGCTTTACTAACA 95944 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 319004539943363