Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq1596 131 1e-25 seq87 123 2e-23 >seq1596 Length=248270 Score = 131 bits (144), Expect = 1e-25 Identities = 207/297 (70%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 72553 CCAGTAAACATCGTTGCCGTTCCAGCTACCTTTTTTGTAGGCCACATACGCAGTGCAATC 72612 ||||||||||||||| || | ||| |||||| || | || || | |||| | Sbjct 113566 CCAGTAAACATCGTTACCATCCCAATCACCTTTCACATATCCAACGTAGTAATTGCATTT 113507 Query 72613 TGGCTCAATCAGGTTTTCTGTAGGGATGTACTGGCAATCAACGTGCCACACAGCCATTGC 72672 ||||| | | |||| | || |||||||||||||||||||| | |||| | || Sbjct 113506 ACTTTCAATTACGGTTTCGTTTGGTATGTACTGGCAATCAACGTGATATTCAGCAAGTGA 113447 Query 72673 ATCAACGCTATCAGCGCAAACAGGCCGATCGATATCTCGACCACAATTCCAGGCTTTTTG 72732 |||||| |||| | | |||||| | || ||| || || | ||| || ||||| Sbjct 113446 TAGAACGCTTTCAGTGGATACAGGCTGGTCAATACTTCTCCCGTGCTCCCACGCCTTTTG 113387 Query 72733 GGCTTCTTCCAGCGTGTAAACATGGGCGCGATCGATATCAGAACTGTAACCATTACCGTT 72792 || |||||||| ||||| || || || ||||||||||| ||||| || |||| Sbjct 113386 CGCCTCTTCCAGAGTGTATACGTGAGCCTTATCGATATCAGTGGCATAACCTTTGCCGTC 113327 Query 72793 ATGGCAATGGAATGAGGCGTTATTACCTACAGTTTCACGCAAGCACATCATGTAAAA 72849 | |||||| ||||| ||||| | || || ||||| || ||| ||||||||||| Sbjct 113326 CTTGCAATGAAATGATGCGTTGCTCCCCACCGTTTCGCGGGTGCATATCATGTAAAA 113270 Score = 100 bits (110), Expect = 2e-16 Identities = 79/95 (83%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 109178 TATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCTTTAACTCTCTGACTCCG 109237 ||||| || ||||| ||||||||||| |||||||| || || ||||||||||||||| Sbjct 48828 TATCCACAACTGACTATCCGTGTATCGGGTTATGCGGTGCGTTTTAACTCTCTGACTAAA 48887 Query 109238 GAACAGCAGCGCGACGTTATCGCTCGTACCTTTAC 109272 |||||||||| |||||||| ||||||| || || Sbjct 48888 GAACAGCAGCAAGACGTTATTACTCGTACTTTCAC 48922 >seq87 Length=489008 Score = 123 bits (136), Expect = 2e-23 Identities = 76/80 (95%), Gaps = 1/80 (1%) Strand=Plus/Minus Query 9581 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTA 9640 ||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 311562 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAATCGATTATGAGTCGACTGCTCTA 311503 Query 9641 ACC-ACTGAGCTAAGGGGCC 9659 ||| |||||||||||||||| Sbjct 311502 ACCAACTGAGCTAAGGGGCC 311483 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386868723100507