Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq1368 100 4e-16 >seq1368 Length=130540 Score = 100 bits (110), Expect = 4e-16 Identities = 197/286 (69%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 161408 GCTAAACTCTATGGATATTGGATTGTAAAGAACTACAGAGAGAGTTATGGGATGCACGCC 161467 || ||| | || || | |||||||| | ||||| ||||| || ||| |||| Sbjct 18266 GCCAAAATGTACGGTTTCTGGATTGTCATCAACTATAGAGAAGCCTACAATATGTTCGCC 18325 Query 161468 AGTAGTGGTATTCTATTCAACCATGAGTCACCACGACGGGGTGAGACTTTCGTAACCCGT 161527 | | |||||| || || || || || ||||| ||| | ||||| | ||| ||||| ||| Sbjct 18326 TGCAATGGTATACTCTTTAATCACGAATCACCGCGAAGAGGTGAAAATTTTGTAACACGT 18385 Query 161528 AAGATTACTAGGGGACTATCCCGTAT-TAGTACAGGACTACAGGATTGTCTATACCTAGG 161586 || ||||| | | || | || || || | | ||| | | | | || Sbjct 18386 AAAATTACCCGATCAGTAGCAAAAATCTATCTCAAT-CAATTGGAATACTTTGAATTGGG 18444 Query 161587 TAATCTAAACTCAAGACGAGATTGGGGTCATGCTGAAGACTATGTGGAGGCTATGTGGTT 161646 |||| || | |||| ||| ||||||||||||||| || ||||| ||||| |||||| | Sbjct 18445 TAATTTAGATTCAAAACGTGATTGGGGTCATGCTATGGATTATGTAGAGGCCATGTGGAT 18504 Query 161647 GATGTTACAACAGGA-AACTCCTGATGACTATGTGATTGCCACAGG 161691 |||||| |||||||| || ||| | || ||||| |||||||| || Sbjct 18505 GATGTTGCAACAGGAGAAACCCTCA-GATTATGTCATTGCCACCGG 18549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729913970382440