Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_027388.1 Length=73050 Score E Sequences producing significant alignments: (Bits) Value seq410 105 3e-18 >seq410 Length=72445 Score = 105 bits (116), Expect = 3e-18 Identities = 225/335 (67%), Gaps = 6/335 (2%) Strand=Plus/Minus Query 70574 ACGAAGTCGTAGGTGAATCGGTCAGGCCATGCACCACGGAACTCTTCCCGCGAGCAGGGG 70633 || || || || | |||||| ||||||||||||||| || || | || ||| Sbjct 22399 ACAAATTCATACGAGAATCGCTCAGGCCATGCACCAACAAATTCATGTTCTTCACAAGGG 22340 Query 70634 AACCGCTCACATACCGGGTAGACGTTGACCTTCCAAGCACCAGACTCCACTGCTTTGTAC 70693 || |||||||| | ||||| ||||| || | |||| | || ||||| || || | || Sbjct 22339 AAGCGCTCACAGATAGGGTAAACGTTAACGTACCAACCGCCTGACTCAACGGCCTCATAT 22280 Query 70694 AATGGATCCTTCGCGTTGAACGGTGTACCCGACCAGATGATCATGTTCTTCTTCGGGTGC 70753 | ||| ||| || || || ||||| ||| ||| | ||||| | |||| Sbjct 22279 AGAACATCATTCTTATTAAAAGGCGTACCATTAAAGACAATCTTTTTCTTTGTTGGGTCA 22220 Query 70754 AGTGCATAGTCCACTGCCTTGTACACCGTGTCCTCAATGGCTGCGATGACAGTGGGCGAG 70813 || |||| ||| || | || ||||| ||||||| ||| ||| | || | || || Sbjct 22219 AGGGCATGGTCAACACCGTTATACACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGAC 22160 Query 70814 CGAGCATCTTCGTCCGAAACCAAGTCATCCAGTACCGCAAGCTGCGGACGTTTACC---C 70870 |||||| ||||| || |||||||| ||||| || || ||||| ||||| | Sbjct 22159 TTAGCATCCTCGTCACTCACTAAGTCATCAAGTACAGCCAGGGTAGGACGCTTACCATAC 22100 Query 70871 ATCTCCTTCGCACCACGGACACCAGTCTTGGCACC 70905 || | || |||||||| ||| ||||| ||||| Sbjct 22099 ATTTTATT---ACCACGGATACCTGTCTTAGCACC 22068 Score = 91.5 bits (100), Expect = 7e-14 Identities = 121/168 (72%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 64094 ACCAACACGGTTCACACGACCGCCGATTTCGGTGAGGGTCGGCATTTTCGCAGTGATGTT 64153 |||||||||||| |||||||| || ||| | | ||||||||| || ||| || Sbjct 34470 ACCAACACGGTTAACACGACCACCTTCTTCACCCATGTACGGCATTTTATCAAGGATTTT 34411 Query 64154 GCCCACGTCACGGCTCGAACCGTAGAGGTTGCCGTTGGCGATGGTAGCGCCGGAAGCGTC 64213 || ||||| |||||||| | ||| || | ||| || |||| ||||| || Sbjct 34410 ACCAACGTCTTTAGAAGAACCGTATAAGTTACCATCTTTGATTTTAACGCCAGAAGCATC 34351 Query 64214 GATGCCCTGGTCGTTCACGTTGCGGTCGTCGAGCAGCGGGATGTAGTG 64261 ||| || |||||||||||||| ||||| || |||| || |||||||| Sbjct 34350 GATACCTTGGTCGTTCACGTTACGGTCATCCAGCAATGGAATGTAGTG 34303 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 233630322354123