Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_027404.1 Length=167785 Score E Sequences producing significant alignments: (Bits) Value seq1596 102 9e-17 seq613 86.0 7e-12 >seq1596 Length=248270 Score = 102 bits (112), Expect = 9e-17 Identities = 88/109 (81%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 61045 ATTACAAACTCTCGGTAAAGGTACGAGCGATAACGTCGCGCTGCTGTTCCGGAGTCAGAG 61104 |||||| | | ||| || ||||||| |||||||| |||||||||| |||||||| Sbjct 48936 ATTACAGAGTACTGGTGAAAGTACGAGTAATAACGTCTTGCTGCTGTTCTTTAGTCAGAG 48877 Query 61105 AGTTAAAGCGAACTGCATAACCGGATACACGGATGGTCAGCTGCGGATA 61153 ||||||| || || |||||||| ||||||||||| ||||| || ||||| Sbjct 48876 AGTTAAAACGCACCGCATAACCCGATACACGGATAGTCAGTTGTGGATA 48828 >seq613 Length=31296 Score = 86.0 bits (94), Expect = 7e-12 Identities = 89/112 (79%), Gaps = 6/112 (5%) Strand=Plus/Minus Query 68797 CGCTCTACCAAACTGAGCTACACGGAGTAGATTAAATTGGAGCGGATAATGAGAATCGAA 68856 ||||||||||| |||||||| | || | || ||||||||| | | |||||||| Sbjct 4254 CGCTCTACCAA-CTGAGCTATATC-AGCACATC---TTGGAGCGGGCAGCGGGAATCGAA 4200 Query 68857 CTCACATCATCAGATTGGAAGTCTGAGGTAATA-CCATTATACGATATCCGC 68907 | | ||||||||| ||||||| ||||||||||| |||||||||||| |||| Sbjct 4199 CCCGCATCATCAGCTTGGAAGGCTGAGGTAATAGCCATTATACGATGCCCGC 4148 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536772506112600