Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq165 134 4e-27 >seq165 Length=448888 Score = 134 bits (148), Expect = 4e-27 Identities = 194/271 (72%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 41187 ATTGGCAACTTAGGCAACGATCCAGAAATCCGTTACATGCCAAGCGGCGGCGCGGTTGCT 41246 || || ||||| || | ||||| ||||||||||||||||| | |||||| || || || Sbjct 55759 ATCGGTAACTTGGGGCAAGATCCTGAAATCCGTTACATGCCTAACGGCGGTGCTGTGGCA 55700 Query 41247 AATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAGAAGAAAGAA 41306 || |||| | || || ||||||||||| ||||| ||||| || | | ||| Sbjct 55699 AACCTAACTCTGGCAACTTCTGAAAGCTGGCGCGATAAGCAAACCGGTGAAATGCGTGAA 55640 Query 41307 CAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCTAGCGAATAC 41366 |||| ||||||||||| || || || ||||| || | || ||| |||| ||||||| Sbjct 55639 AAAACCGAATGGCACCGTGTAGTGATTTTCGGAAAATTAGCTGAAGTTGCGGGCGAATAT 55580 Query 41367 CTGCGCAAAGG-TAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAATGGCAGGA 41425 ||| ||||| | ||| || | ||||||||| ||| ||| ||||| ||||| || Sbjct 55579 CTGAAAAAAGGCTCACAA-GTTTACATTGAAGGTTCTTTGCAAACACGTAAGTGGCAAGA 55521 Query 41426 CCAGGCTGGCGTTGATCGCTACACCACTGAA 41456 || ||| ||||| |||||||| ||| Sbjct 55520 TCAAAGTGGTCAAGATCGTTACACCACAGAA 55490 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133206890266968