Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1531 113 5e-20 seq583 84.2 2e-11 >seq1531 Length=926236 Score = 113 bits (124), Expect = 5e-20 Identities = 185/267 (69%), Gaps = 0/267 (0%) Strand=Plus/Minus Query 117304 AGTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTG 117363 ||||||||| ||||||| ||| ||| ||| ||||| || | | ||| ||||||||||| Sbjct 339004 AGTGAAAATATAACGAGCGCTGGCACAATCTTTGCCGCCCGTTAAACGTGTACCGAATTG 338945 Query 117364 TCCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGAC 117423 || || ||||| | ||| || | || || | ||||||| ||||||| ||||| || || Sbjct 338944 ACCTCTAGGCTCTAGGAGATTAATATTATTCGAGCCCACATAGTTTTGGGCCAAATTAAC 338885 Query 117424 AATCGTACCTTGGAGGCTCGCCTCACCATGGTGATACGCCGTCTGCTCCGCCACGTAGCC 117483 ||| || ||| | ||||||| || || || || | | || ||||| | || Sbjct 338884 AATGGTCATTTGTAATGAAACCTCACCGTGATGGTAAGCGGACATTTCAGCCACCGAACC 338825 Query 117484 CGCCAGCTGAGCCACCTTCATGTCTGACGTCAGGTTCTTCTTGAGGCAGGCATAAATCAC 117543 | ||| |||||||| || | ||| | | || ||| | ||||| | || || Sbjct 338824 AGACAGTTGAGCCACTTTAACTTCTCTCTTATCATTACGCTTAAAGCAGGTGAACATAAC 338765 Query 117544 CTTGCGCTGACTTGGCTTCAGACCATC 117570 ||| || |||| ||||| | |||||| Sbjct 338764 CTTACGTTGACCCGGCTTAAAACCATC 338738 >seq583 Length=2816 Score = 84.2 bits (92), Expect = 2e-11 Identities = 70/86 (81%), Gaps = 0/86 (0%) Strand=Plus/Minus Query 74808 CCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAG 74867 |||||||| | ||||||||||||||||| || |||||| ||| ||||||||||||||| Sbjct 265 CCAGGCATCAAGCCACGCTTCTTCAACCAGAAAATGGCAGCGAATGAACCACTGAAGAAG 206 Query 74868 ATGCCTTCGACACACGCAAAGGCGAC 74893 | || |||||| || || ||||| Sbjct 205 ACACCCTCGACAGCAGCGAAAGCGAC 180 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547204282737400