Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq964 131 1e-25 seq1190 98.7 6e-16 >seq964 Length=291957 Score = 131 bits (144), Expect = 1e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 |||||||| || ||||||||||| ||||| || ||||| ||||| ||||| || || Sbjct 216872 AGACGCAATACTAAATGGAGAGTAGATTCCTTCTGGATGTTGTAATCCGAAAGGGTGCGT 216813 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 | ||||| | ||||||||||||||| || ||||| |||||||| || || | || ||| Sbjct 216812 CCATCTTCCAATTGTTTACCGGCAAAGATCAAACGTTGTTGGTCTGGGGGAATACCTTCC 216753 Query 34609 TTGTCTGTGATCTTTTGTTTTAACG-ATAAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 || ||| |||| || | || ||| | ||| || || || ||||||| || Sbjct 216752 TTATCTTGGATC-TTAGCCTTGACGTTTTCAATGGTATCGGAAGGTTCAACTTCCAAAGT 216694 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || ||||| ||||| || |||||||| || |||||||| Sbjct 216693 GATGGTTTTTCCGGTCAAAGTTTTCACGAAGATCTGCAT 216655 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 34478 CGCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTG 34537 |||| || | |||||| | |||||||||||| ||| ||||||||| ||||| || || | Sbjct 217111 CGCCTCCACGAAGACGTAGCACCAAATGGAGGGTGGACTCCTTTTGGATGTTGTAGTCAG 217052 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | | || || | ||||| |||||||||||||| || || ||||| || || || || | Sbjct 217051 ACAAGGTACGACCATCTTCCAGTTGTTTACCGGCGAAGATCAAACGTTGCTGATCTGGGG 216992 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | || ||||| || ||| ||| | || ||| | ||| || || || Sbjct 216991 GAATACCTTCCTTATCCTGGAT-TTTAGCCTTTACGTTCTCAATGGTATCGGAAGGTTCG 216933 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 ||||||| || || ||||| ||||| || ||||| || || || ||||| Sbjct 216932 ACTTCCAAAGTGATGGTTTTGCCGGTCAAGGTTTTAACGAAGATTTGCAT 216883 Score = 102 bits (112), Expect = 5e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34498 ACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTCGTCTTCA 34557 ||||| |||||||| || |||||||| |||||||| || | || || ||||||| Sbjct 215392 ACCAAGTGGAGAGTAGATTCTTTTTGAATATTATAATCGGACAAAGTGCGTCCGTCTTCC 215333 Query 34558 AGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTTGTCTGTG 34617 | ||||||||||||||| |||| ||| ||||| || || || | |||||||| ||| || Sbjct 215332 AATTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGGGAATACCCTCCTTATCT-TG 215274 Query 34618 ATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTATCGTTTT 34676 | ||| | ||||| | ||| || || || || || | ||| || || || Sbjct 215273 AATTTTAGCCTTAACATTTTCAATCGTATCCGAAGGTTCGACCTCAAGGGTGATGGTCTT 215214 Query 34677 ACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 || ||||| || ||||| || || ||||| || Sbjct 215213 GCCAGTTAAAGTCTTCACGAAGATTTGCATTTT 215181 Score = 102 bits (112), Expect = 5e-17 Identities = 155/218 (71%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 34491 ACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGCTC 34550 |||||| ||||| || || || || ||||||||||||||||| || | || || | Sbjct 215855 ACGCAATACCAAGTGAAGGGTAGATTCTTTTTGAATGTTATAATCGGATAAAGTGCGGCC 215796 Query 34551 GTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCCTT 34610 ||||| | |||||||| || || || ||||||||||| || || || | || || || Sbjct 215795 ATCTTCCAACTGTTTACCAGCGAAAATCAAACGCTGTTGATCTGGGGGAATACCTTCTTT 215736 Query 34611 GTCTGTGATCTTTTGTTTTAAC-GATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTTA 34669 |||| ||| ||| | |||||| | || || || || || |||| || | Sbjct 215735 GTCTTGGAT-TTTAGCTTTAACATTTTCTATAGTATCCGAAGGTTCAACCTCCAATGTAA 215677 Query 34670 TCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||||||| ||||| ||||| || ||||| |||||| Sbjct 215676 TTGTTTTACCCGTTAATGTTTTAACGAAAATTTGCATG 215639 >seq1190 Length=275307 Score = 98.7 bits (108), Expect = 6e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539 || || | ||| ||||| ||||| || | |||| || |||||||| || ||||| || Sbjct 186899 CCACCACGAAGGCGCAATACCAAGTGCAAAGTGGATTCTTTTTGAATATTGTAATCAGAG 186840 Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599 || || || | ||||| | |||||| || || || || ||||| ||||| || || || Sbjct 186839 AGAGTACGGCCATCTTCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGA 186780 Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659 | ||| || ||||| ||||| ||| | | ||| ||||| ||| || Sbjct 186779 ATTCCTTCTTTGTCCTGAATCTTGGCTTTGACATTTTCAATAGTGTCGGACGGCTCGACC 186720 Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || | || || || ||||| |||| ||||| |||||||||||||| Sbjct 186719 TCAAGAGTGATGGTCTTACCCGTTAGGGTTTTGACAAAAATCTGCAT 186673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314723029331129