Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028659.1 Length=142987 Score E Sequences producing significant alignments: (Bits) Value seq87 129 5e-25 >seq87 Length=489008 Score = 129 bits (142), Expect = 5e-25 Identities = 221/318 (69%), Gaps = 6/318 (2%) Strand=Plus/Minus Query 101345 CTAAGGAGAAAAGATGAAAGTATATCTGGTAGGTGGCGCTGTTCGTGATGGTCTGCTGGG 101404 ||||| | || ||||||| |||||||||||||||| || || ||||| | ||||| || Sbjct 362572 CTAAGTATTAATGATGAAAATATATCTGGTAGGTGGAGCGGTACGTGACGAACTGCTTGG 362513 Query 101405 TCGTCCAGTTCATGACCGTGATTACGTGGTTGTGGGTGCAACACACGAAGAGATGATTGA 101464 | || ||| ||| || ||||| || ||||| || | || | |||| |||| | | Sbjct 362512 CCTGCCTGTTTCTGATCGCGATTATGTCGTTGTCGGCTCTACGCCTGAAGCGATGCTGGC 362453 Query 101465 AAAAGGTTTCACCCAGGTTGGCGCTGCTTTCCCGGTGTACTTGCATCCTGAAACCAAAGA 101524 | |||| | | || || || | |||||| || | | || || ||||| | || Sbjct 362452 ACAAGGCTACCAGCAAGTAGGGAAAGATTTCCCTGTATTTCTACACCCAAAAACCCATGA 362393 Query 101525 AGAATACGCACTGGCCCGTACTGAGCGTAAAACTGGTGAAGGCCATACTGGCTTTGAGAC 101584 |||||| ||| | ||| | || || ||||||||||| || |||| || ||| | Sbjct 362392 AGAATATGCATTAGCCAGAACCGAACGTAAAACTGGCTCGGGTTATACAGGGTTT---AG 362336 Query 101585 CTTCT--TCAGC-CCGGATGTAACTCTGGAAGAGGATTTATCGCGTCGTGACCTGACGAT 101641 || || | || || || || || | ||||| ||| ||| |||||||| ||||| || Sbjct 362335 CTGCTACGCTGCGCCTGACGTTACCATAGAAGATGATCTATTACGTCGTGATCTGACCAT 362276 Query 101642 CAATGCGATGGCTAAAGA 101659 |||||||| || ||||| Sbjct 362275 TAATGCGATTGCGAAAGA 362258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 457420605271560