Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28]
1,713 sequences; 434,128,924 total letters
Query= NC_028686.1
Length=166313
Score E
Sequences producing significant alignments: (Bits) Value
seq253 86.0 7e-12
seq1596 82.4 8e-11
>seq253
Length=360942
Score = 86.0 bits (94), Expect = 7e-12
Identities = 210/313 (67%), Gaps = 4/313 (1%)
Strand=Plus/Plus
Query 28652 GATATCAGGATACATACGTTTAGCT-GCGCATTCTAATGCAAGCTGCTTAATATCATAGT 28710
||| || |||||||| ||||| ||| || || |||||||| | ||| || ||||||||||
Sbjct 105011 GATGTCGGGATACATGCGTTT-GCTCGCACACTCTAATGCTAACTGTTTGATATCATAGT 105069
Query 28711 TCGGGTCTTCTTTACGTAGATTAATGCCTTCTTCTACAAACATCACAAGCTTTGGAAAGA 28770
| || || | | | |||||| ||||| || | | | ||| | || || || |
Sbjct 105070 TAGGATCACCATATTGGTGATTAAGGCCTTTTTTAATAGCAAACACTAATTTAGGGAAAA 105129
Query 28771 TTGGAGTAATTCCATCGCGTCCTAATCCACGAATACGATTATCAAGAATAGCTCGTTGAA 28830
| ||| | | || ||||| ||| ||||| || | ||||| | | |||| |
Sbjct 105130 CGGCAGTTTTACGATTTTTACCTAACCCAGCGATACGGTTTTTTAGAATGGATTGTTGGA 105189
Query 28831 TTAATTTTTCTTCCCATGACGTGCCCATACCAAATGTGATAGTCACAAACGGGGTTTGGC 28890
| || | |||| || ||||| | |||||| | || || || |||||||| |
Sbjct 105190 TCAAGCGTGCTTCTTGCGATGTGCCTAAACCAAACCCAAAGGTTACGAAGGGGGTTTGAC 105249
Query 28891 CATTTGAGCTGAACAAAGTATTCACTTCATATTCATATGCCTGGAAAGCATCAAATACA- 28949
|||| | | | || || |||||||| |||||| | ||||| ||||| | |||
Sbjct 105250 CATTGGCGGTATGCAGTGTGTTCACTTCGTATTCAAGGGATTGGAAGGCATCGTA-ACAT 105308
Query 28950 TCTTTTTCTGTTT 28962
|||||||| ||||
Sbjct 105309 TCTTTTTCGGTTT 105321
>seq1596
Length=248270
Score = 82.4 bits (90), Expect = 8e-11
Identities = 75/95 (79%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 48816 GTGAAAGTACGAGCGATAACGTCGCGCTGCTGTTCCGACGTCAGGGAGTTGAAGCGTACC 48875
||||||||||||| |||||||| |||||||||| ||||| ||||| || || |||
Sbjct 48922 GTGAAAGTACGAGTAATAACGTCTTGCTGCTGTTCTTTAGTCAGAGAGTTAAAACGCACC 48863
Query 48876 GCGTAGCCGGAAACACGAATGGTCAGCTGCGGATA 48910
|| || || || ||||| || ||||| || |||||
Sbjct 48862 GCATAACCCGATACACGGATAGTCAGTTGTGGATA 48828
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 532062206974040
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |