Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028789.1 Length=18609 Score E Sequences producing significant alignments: (Bits) Value seq1089 86.0 7e-13 >seq1089 Length=16580 Score = 86.0 bits (94), Expect = 7e-13 Identities = 136/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 10900 ATTGAAGTCGGAAGAAAACAACTTTTCGACTTTGATTATCCTATCTTTGATGAAGCTTAC 10959 ||||||| || |||||||| || ||| |||| |||| ||| ||||| ||||| ||| Sbjct 5283 ATTGAAGAAGGTAGAAAACACCTGTTCAACTTCAATTACCCTTTCTTTTCAGAAGCATAC 5342 Query 10960 AGGAATGTGTTTGAAACACATTTCATTAAAGAGTTTTATATGAGGGAATACGGGTTTGAA 11019 | || |||||||| |||| || | || || ||| | ||| ||||||||| Sbjct 5343 AAAAAACAATTTGAAACCAATTTTATACGTCATTTCTACATGCGTGAAATTGGGTTTGAA 5402 Query 11020 ACAGTTGGTTTATTTAAATTACGTTTGGAGATATGGTTACAGACAAACATGCCATACTTC 11079 |||| || | ||||| || | |||| | ||||||| | | |||||||| || | Sbjct 5403 ACAGAAGGACTTTTTAAGTTCTATCTGGAAACATGGTTAAATATTAACATGCCTTATTGG 5462 Query 11080 AATAAATTGTTTCAA 11094 || ||| ||||| || Sbjct 5463 AACAAAATGTTTGAA 5477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 59429222888068