Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028908.1 Length=72409 Score E Sequences producing significant alignments: (Bits) Value seq410 82.4 4e-11 >seq410 Length=72445 Score = 82.4 bits (90), Expect = 4e-11 Identities = 144/208 (69%), Gaps = 4/208 (2%) Strand=Plus/Minus Query 68222 CTTATTGAAGGGGGTGCCATTGAAGATCACCTTCCGGCGAGTCGGGTCCAGAGCGTGGTT 68281 |||||| || || || ||||| |||| | ||| || ||||| || || |||| Sbjct 22268 CTTATTAAAAGGCGTACCATTAAAGACAATCTTTTTCTTTGTTGGGTCAAGGGCATGGTC 22209 Query 68282 CACCCCCTTATATACAGTGTCCTTGATCGACTGCATAGCAGCCGGAGACTTGGCGTCATC 68341 || || ||||| ||||||||||| |||| | ||| | | |||||| || || || Sbjct 22208 AACACCGTTATACACAGTGTCCTTAATCGCTTCCATTTCTGTTTTAGACTTAGCATCCTC 22149 Query 68342 GTCAGACACCAAGTCATCCAGGATGCAG--AGCACCGGGCGCTTCCCGAAAATCTTGGAA 68399 |||| ||| |||||||| || | ||| || || ||||| || | || || | Sbjct 22148 GTCACTCACTAAGTCATCAAG--TACAGCCAGGGTAGGACGCTTACCATACATTTTATTA 22091 Query 68400 CCACGGAGACCAGTCTTGGCACCGAACA 68427 ||||||| ||| ||||| ||||| |||| Sbjct 22090 CCACGGATACCTGTCTTAGCACCAAACA 22063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231579165177410