Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_028925.1 Length=170822 Score E Sequences producing significant alignments: (Bits) Value seq253 109 6e-19 >seq253 Length=360942 Score = 109 bits (120), Expect = 6e-19 Identities = 318/479 (66%), Gaps = 23/479 (5%) Strand=Plus/Plus Query 39623 GCAATACGAGGAAGATTCAGTGTTACAACACCAAGATTATTACGTCCATCAAGAATTTCA 39682 |||||||| || || || || | | ||||| | ||||||||| |||||| |||||| Sbjct 104859 GCAATACGCGGCAGGTTAAGGCTAATGACACCTAAATTATTACGGCCATCATGAATTTGT 104918 Query 39683 TTACCAGTCGAATCTTTCCATACGCTCAAGAAACTACGGCAACCCATTGGAGAAACAGGA 39742 | ||| | |||| | || | ||||| || ||||| |||||||| | | | Sbjct 104919 TGGCCATTT---TCTTCGTAGACACCTAAGAAGCTGCGGCAGCCCATTGGCGTTTTA--A 104973 Query 39743 ACAGATGAGCCGGTGATAGCTTTA--TTGTTCTTAGCTGAAATAATATCAGGATACATCC 39800 || ||||| || | | | | || || ||| | || || || |||||||| | Sbjct 104974 AC----GAGCCCGTTACATCGACAACTTTGTCATAGTTTAAG--ATGTCGGGATACATGC 105027 Query 39801 TTTTGCTTGCACACTCTAGAGCAAGCTGCTTGATATCATAGTTCGGGTCGTCTTTATAAA 39860 |||||| |||||||||| || | ||| |||||||||||||| || || | | | Sbjct 105028 GTTTGCTCGCACACTCTAATGCTAACTGTTTGATATCATAGTTAGGATCACCATATTGGT 105087 Query 39861 GATTAACACCTTCTTCAA---CAAACATAACAAGCTTAGGGAAAATAGGAGTTATTCCAT 39917 |||||| |||| || || ||||| || | |||||||||| | |||| | | || Sbjct 105088 GATTAAGGCCTTTTTTAATAGCAAAC---ACTAATTTAGGGAAAACGGCAGTTTTACGAT 105144 Query 39918 CACGACCAAGACCTTTAATACGATTTTTCAGAATTGCTTTCTGAATCATTCGTTCAGTCC 39977 ||| | || ||||| ||||| ||||| | || || |||| ||| | || Sbjct 105145 TTTTACCTAACCCAGCGATACGGTTTTTTAGAATGGATTGTTGGATCAAGCGTGC-TTCT 105203 Query 39978 AGTCA-GTTCCCGTACCAAATGTAATTGTCACAAAAGGGGTCTGTCCGTTTGAACTAAAG 40036 | | || || |||||| || || || || ||||| || || || | || Sbjct 105204 TGCGATGTGCCTAAACCAAACCCAAAGGTTACGAAGGGGGTTTGACCATTGGCGGTATGC 105263 Query 40037 AGAGTGTTTACTTCATATTCATAAGCTTGGAATGCATCATATACA-TCTTTTTCTGTTT 40094 || ||||| ||||| |||||| | |||||| ||||| || ||| |||||||| |||| Sbjct 105264 AGTGTGTTCACTTCGTATTCAAGGGATTGGAAGGCATCGTA-ACATTCTTTTTCGGTTT 105321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546490698017360