Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_029000.1 Length=162327 Score E Sequences producing significant alignments: (Bits) Value seq253 114 1e-20 >seq253 Length=360942 Score = 114 bits (126), Expect = 1e-20 Identities = 254/374 (68%), Gaps = 8/374 (2%) Strand=Plus/Plus Query 40570 ACCAAGATACCCACAAACTCTTCGTGTAACTGA--CATCTTTGCCGAGTCGTGGTTACCA 40627 ||| ||||| ||||| ||||| || | || || || ||| | ||| ||||||||| Sbjct 104054 ACCTAGATAACCACACACTCTACGGATCACGGAGACACGGTTG--GTGTCATGGTTACCA 104111 Query 40628 CAGCTCGGACAACTAAATCCTTTCGAGGTGCATTTGAATTCACCGTCAAAACCACATTCA 40687 || | || || ||| ||||| ||| || || ||||||||| ||| ||||||||| Sbjct 104112 CAACGTGGGCACACAAAACCTTTACTGGTACAGTTAAATTCACCGGTAAATCCACATTCA 104171 Query 40688 TAACATTTATCGACAGGCGTGTTTGTTCCAAAATAGGAAAGATTTTCCATCGC-GTAATC 40746 ||||||| ||| | ||||||||| |||||| |||| | | || | ||| || ||| || Sbjct 104172 TAACATTCATCAATAGGCGTGTTGGTTCCATAATAAGGTACATGCT-CATAGCTGTAGTC 104230 Query 40747 CCAAATTTGCTCAAGGGCCTCGAGATTGTTTCGCATATTGGGTAGTTCGACATAGCTGAT 40806 ||||| | ||||| || | | |||| | | || || ||| | |||| || Sbjct 104231 CCAAACGTCTTCAAGTGCTTTCAAGTTGTGCTGTAAGTTTGGATACTCGCCGTAGCAAAT 104290 Query 40807 ATGCCCGCCTGATGCAATCCAATGGAATTCTTTTTCGGCATCTATTTTGTCATACGGGTT 40866 | ||||| ||| | | || || | ||| ||| || || || || ||||| Sbjct 104291 AAAACCGCCATTTGCGAGAGCAGGGTATGGCTGTTCAAAATCAATCTTATCGTATGGGTT 104350 Query 40867 CAACTCG-GCATCAACAGGAATATGGAAGCTATTCGTATACCAATCCTTGTCCGTAATTC 40925 ||| || |||||| || ||||| ||||| || || || | || ||||||| | Sbjct 104351 -AACGCGTTTTTCAACATCAAGGTGGAAACTATTGGTGTAGTAACCTTTTTCCGTAACAC 104409 Query 40926 CTTCGATAACGCCA 40939 |||||||||| ||| Sbjct 104410 CTTCGATAACCCCA 104423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 519307280094760