Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_029057.1 Length=134742 Score E Sequences producing significant alignments: (Bits) Value seq253 84.2 2e-11 >seq253 Length=360942 Score = 84.2 bits (92), Expect = 2e-11 Identities = 193/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 76339 TAAGAAACTACGACAACTCATACTTGC-TTTAAAACTA-CCTGTAACTTCTACAGTTTTA 76396 |||||| || || || | ||| | || ||| |||| | || || || || ||| ||| Sbjct 104942 TAAGAAGCTGCGGCAGCCCAT--TGGCGTTTTAAACGAGCCCGTTACATCGACAACTTTG 104999 Query 76397 TCATAATTTAAGATATCAGGGTAAAGTCGTTTACTTGAACATTCCAAAGCTAATTGTTTA 76456 ||||| |||||||| || || || | ||||| || | ||| || || ||||| ||||| Sbjct 105000 TCATAGTTTAAGATGTCGGGATACATGCGTTTGCTCGCACACTCTAATGCTAACTGTTTG 105059 Query 76457 ATGTCATAGTTCGGATCTTCTGGTTTATGATTTACACCATCCTTTACACTGTAGATTAGT 76516 || |||||||| ||||| | || ||||| | || | || | | | | || | Sbjct 105060 ATATCATAGTTAGGATCACCATATTGGTGATTAAGGCCTTTTTTAATAGCAAACACTAAT 105119 Query 76517 TTAGGGAAAATTGGTGTTACATGATTCTTACCTAATCCATCAATTTGTGCTTGTAGTATC 76576 |||||||||| | ||| | |||| |||||||| ||| | || | || ||| || Sbjct 105120 TTAGGGAAAACGGCAGTTTTACGATTTTTACCTAACCCAGCGATACGGTTTTTTAGAATG 105179 Query 76577 ATCTCTTGAACTAATTTAGCTTCCCATGATGTCCCTAATCCAAACCC 76623 | ||| | || ||||| ||||| ||||| |||||||| Sbjct 105180 GATTGTTGGATCAAGCGTGCTTCTTGCGATGTGCCTAAACCAAACCC 105226 Score = 84.2 bits (92), Expect = 2e-11 Identities = 193/287 (67%), Gaps = 4/287 (1%) Strand=Plus/Plus Query 77347 TAAGAAACTACGACAACTCATACTTGC-TTTAAAACTA-CCTGTAACTTCTACAGTTTTA 77404 |||||| || || || | ||| | || ||| |||| | || || || || ||| ||| Sbjct 104942 TAAGAAGCTGCGGCAGCCCAT--TGGCGTTTTAAACGAGCCCGTTACATCGACAACTTTG 104999 Query 77405 TCATAATTTAAGATATCAGGGTAAAGTCGTTTACTTGAACATTCCAAAGCTAATTGTTTA 77464 ||||| |||||||| || || || | ||||| || | ||| || || ||||| ||||| Sbjct 105000 TCATAGTTTAAGATGTCGGGATACATGCGTTTGCTCGCACACTCTAATGCTAACTGTTTG 105059 Query 77465 ATGTCATAGTTCGGATCTTCTGGTTTATGATTTACACCATCCTTTACACTGTAGATTAGT 77524 || |||||||| ||||| | || ||||| | || | || | | | | || | Sbjct 105060 ATATCATAGTTAGGATCACCATATTGGTGATTAAGGCCTTTTTTAATAGCAAACACTAAT 105119 Query 77525 TTAGGGAAAATTGGTGTTACATGATTCTTACCTAATCCATCAATTTGTGCTTGTAGTATC 77584 |||||||||| | ||| | |||| |||||||| ||| | || | || ||| || Sbjct 105120 TTAGGGAAAACGGCAGTTTTACGATTTTTACCTAACCCAGCGATACGGTTTTTTAGAATG 105179 Query 77585 ATCTCTTGAACTAATTTAGCTTCCCATGATGTCCCTAATCCAAACCC 77631 | ||| | || ||||| ||||| ||||| |||||||| Sbjct 105180 GATTGTTGGATCAAGCGTGCTTCTTGCGATGTGCCTAAACCAAACCC 105226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 431040600896679