Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_029255.1 Length=129563 Score E Sequences producing significant alignments: (Bits) Value seq1303 123 2e-23 >seq1303 Length=344040 Score = 123 bits (136), Expect = 2e-23 Identities = 202/291 (69%), Gaps = 0/291 (0%) Strand=Plus/Plus Query 118374 AAAATCTTCAAACTTAAAGTCTTCTATATTTTTGATATCCTTGTTTATGGATAGTGTGGG 118433 |||||||||||| || || || ||||||| || | || ||||| | | | || Sbjct 95758 AAAATCTTCAAATTTGAAATCCTCTATATCCTTAACTTCACGTTTTATAAGCAATTTAGG 95817 Query 118434 AAACGGGAGAGGCTCCCTTGTGAGTTGGAGTTTCAGTGGCTCAATGTGATTCATATAGAC 118493 || || | || | | | | | ||| |||| || ||||| |||||| |||| || Sbjct 95818 GAAAGGACGTGGTTTACGTTTCAATTGTTCCTTCAAAGGTTCAATATGATTCTTATAAAC 95877 Query 118494 ATGAGCATCCCCAATTGTATGTATGAATTCACCAGGTGTAAGCCCTGTCAGGTGAGCAAT 118553 ||||| ||| ||| | ||||| || || || || ||| | | || || | |||||||| Sbjct 95878 ATGAGTATCACCAGTGGTATGAATAAAATCTCCTGGTTTCAAACCGGTAATATGAGCAAT 95937 Query 118554 CATGTATGTCAACAAACTGTAGCTGGCTACATTAAAAGGAACACCCAGACCCATGTCTGC 118613 ||| ||||| | ||| || |||| |||||| || ||||||||||||||||| || Sbjct 95938 CATATATGTTAGTAAAGCATATGAAGCTATATTAAATGGTACACCCAGACCCATGTCAGC 95997 Query 118614 TGATCTCTGGTACAATTGGCAAGAGAGCTCCCCGTTTGCAACATAAAACTG 118664 | |||||||| ||||| || || || || ||||| ||||| || || Sbjct 95998 GCTGCGTTGGTACAACTGGCATGATAGTTCACCATTTGCCACATAGAATTG 96048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 414468146890132