Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Lucilia_20cuprina_20[genbank_20GCA_5F001187945.1_202015-07-28] 1,713 sequences; 434,128,924 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq964 107 2e-18 seq1190 89.7 4e-13 >seq964 Length=291957 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101010 TGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGG 101069 |||| || ||||| | ||| |||| ||||| || ||||||||||| ||||| ||||| | Sbjct 215640 TGCCACCACGCAAACGTAATACCAAATGCAATGTAGATTCTTTTTGTATATTATAATCAG 215581 Query 101070 CCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 || || ||||||||||||||||| ||| | || | | |||||| ||| | Sbjct 215580 ACAATGTGCGCCCGTCTTCCAATTGTTTGCCAGCAAAAATCAAACGTTGTTGATCTGGTG 215521 Query 101130 GCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTG 101189 | | ||||||||||| |||||| ||| |||| | | || || | | | Sbjct 215520 GGATTCCTTCTTTGTCTTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAAGGCTCAA 215461 Query 101190 TTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || |||||||| |||||||| |||| ||| |||||||| Sbjct 215460 CTTCCAAAGTGATGGTTTTGCCAGTCAATGTCTTAACAAAGATTTGCAT 215412 Score = 86.0 bits (94), Expect = 5e-12 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101010 TGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGG 101069 |||| || ||||| | || |||| ||| | ||| ||||||||||||||||| ||||||| Sbjct 215412 TGCCACCACGCAAACGTAGAACCAAGTGGAGAGTAGATTCTTTTTGAATATTATAATCGG 215353 Query 101070 CCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGG 101129 || ||| |||||||||||||| || ||| | || || | |||||| ||| || Sbjct 215352 ACAAAGTGCGTCCGTCTTCCAATTGTTTACCGGCAAAAATTAGACGTTGTTGATCTGGGG 215293 Query 101130 GCACGCCTTCTTTGTCGGCAATTTT 101154 | | || || || || |||||| Sbjct 215292 GAATACCCTCCTTATCTTGAATTTT 215268 >seq1190 Length=275307 Score = 89.7 bits (98), Expect = 4e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 101027 AACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCT 101086 || |||| ||||||||| ||||||||||||||||||||||| | | ||| | |||| Sbjct 186884 AATACCAAGTGCAAAGTGGATTCTTTTTGAATATTGTAATCAGAGAGAGTACGGCCATCT 186825 Query 101087 TCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||||||||||| || || | || | | |||||| ||| || | ||||||||||| Sbjct 186824 TCCAATTGTTTTCCAGCGAAAATCAAACGTTGTTGATCTGGTGGAATTCCTTCTTTGTC 186766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409652247434667